PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.E7L1K

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 504aa MW: 58455.7 Da PI: 9.3795

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.E7L1K	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.4	1.3e-19	23	109	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk+vGF ++++ +++ +++ +++ +C++egkr+++ + ++t++ t+ +C a++ ++++k+g w ++k+ l+H+H++ Aradu.E7L1K 23 QFYQNYAKRVGFVTKIRFTRRVGKDKVPKNQMITCNREGKRKSRVSP---IEKTNPRTNYNCPARISIRLNKEGLWIISKVCLDHSHPCD 109 6****************************************9877...999********************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	7.7E-17	23	109	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence Send to blast
MLTFLQDVPK VGMCFGTIED ANQFYQNYAK RVGFVTKIRF TRRVGKDKVP KNQMITCNRE 60 GKRKSRVSPI EKTNPRTNYN CPARISIRLN KEGLWIISKV CLDHSHPCDP EMAKLLTRNR 120 EMTMHMCRVI ERNDEAGVRP SKRYQVLVGD AGDIYEERHR WVSIFLDNFF WAGMRSTQQT 180 ESMHSYFDKF LNNKSLLIQF VKQYDNCLGW KEQQEREADV EDYKSIIPCA TNSLIEKQFQ 240 GAYTNAKFKE VQKQFRKKAS CILHLMKAVS TSKVYSILED VSTSKERVYE VNYNAKTKDI 300 TCKCQMFESR GILCSYSLVV LGNEHVREIS RRYILDRWSK LVKWTRRHSD IKSSHDSSLL 360 NPKTERFDDL CSHSNSVAQF ASQTKETSDI LHRYLDMAMA ECQKHVANSS SNPNELDILF 420 EENKSLTRNH QHPGAYQGQN GLEKVIIKVE EEKSYYRVAA VISQTGGGQS THENGVATSY 480 HIKLQLQFPK LYHNKPLVTT EIIT

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence Send to blast

MLTFLQDVPK VGMCFGTIED ANQFYQNYAK RVGFVTKIRF TRRVGKDKVP KNQMITCNRE  60
GKRKSRVSPI EKTNPRTNYN CPARISIRLN KEGLWIISKV CLDHSHPCDP EMAKLLTRNR  120
EMTMHMCRVI ERNDEAGVRP SKRYQVLVGD AGDIYEERHR WVSIFLDNFF WAGMRSTQQT  180
ESMHSYFDKF LNNKSLLIQF VKQYDNCLGW KEQQEREADV EDYKSIIPCA TNSLIEKQFQ  240
GAYTNAKFKE VQKQFRKKAS CILHLMKAVS TSKVYSILED VSTSKERVYE VNYNAKTKDI  300
TCKCQMFESR GILCSYSLVV LGNEHVREIS RRYILDRWSK LVKWTRRHSD IKSSHDSSLL  360
NPKTERFDDL CSHSNSVAQF ASQTKETSDI LHRYLDMAMA ECQKHVANSS SNPNELDILF  420
EENKSLTRNH QHPGAYQGQN GLEKVIIKVE EEKSYYRVAA VISQTGGGQS THENGVATSY  480
HIKLQLQFPK LYHNKPLVTT EIIT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.E7L1K

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025608198.1	0.0	uncharacterized protein LOC112701685
TrEMBL	A0A444XQD3	1e-178	A0A444XQD3_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	8e-29	far-red elongated hypocotyls 3