PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.DZ0GE
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 1037aa    MW: 116769 Da    PI: 6.3002
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.DZ0GEgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.3e-051964655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   +E  RR  +++ +++L +l P++    ++K    + L +A++YIksL+
  Aradu.DZ0GE 19 RLIESHRRILMKNLYSKLNSLQPNS----NTKKALPDQLDEAINYIKSLE 64
                 5799********************9....6666667************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000830.00451168No hitNo description
Gene3DG3DSA:4.10.280.101.8E-61277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.291363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.37E-71381IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF525401.39E-37214492IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3002.2E-5237338IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009312.7E-39241518IPR002182NB-ARC
PRINTSPR003644.8E-15249264No hitNo description
PRINTSPR003644.8E-15324338No hitNo description
PRINTSPR003644.8E-15428442No hitNo description
SuperFamilySSF520581.93E-30551601IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.6E-14571617IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.6E-14651666IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.6E-14714864IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520581.93E-307261030IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.0E-88651014IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003644.8E-159861002No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0043531Molecular FunctionADP binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 1037 aa     Download sequence    Send to blast
MEQFTSQPLS SSSKKDDRRL IESHRRILMK NLYSKLNSLQ PNSNTKKALP DQLDEAINYI  60
KSLEEKVKMA EDKKQSLLLV MATCLDTQFI FHEIIRVLHE DHHINFVHSG LIAKLMDKLL  120
ILDDLIEKLQ FSEGERGDKA DEKLKWLHLM QDVVRLEEHH LLQKNSMSLQ KLLKRFKSQI  180
CQILYFILMK GKKDNVVLAL AIGKAEDLHT LPELPLSYVK DCLYGRGEEE KYMLKSLLSS  240
SEQQKQIKVI SIVGKSGVGK TSLADVVYFN PKVLECFDLR AWVTFPHKVT ATFVAKKILE  300
ELVTDDDGEE ELVPGDDFDN LKKRFAGKKL LLVLDDIMVE DDGLHKWDML IASLESAAAR  360
GSAIMLTSIP HDNPELLMIP ACHTVHLDSL SAEDALSVFL VHASSGQTDL HEHPGELAAV  420
GKEIVGKLGN LPLAAKMIGS LFQDKRNPDQ WVEILRSEFL DAGHANLIPI PPFLVLCYLD  480
LPARIKQCFL HLSLFPKGYQ LKRKQVVNLW IAEGFVEIPD FQSSFKSSED IGNAYFSYLV  540
MRSFLQPVRS SVSFIMHNLV HDLATYMVEK LNDCHLSSNQ STDGISNLIN LLHLDMKGSS  600
VQGMPLKFPE FTRLEKLARM EETTRSEFEE IPDEAKMETE SIRRRLPLHL SASDIPSLKR  660
TDIPSFEQQI DPKSSMAKAE IPASIKQEAV LPLMDTPNTT APVKVEALTR EDLDDDKPSF  720
KVLRVSTISQ FKSLPANLHS LKIEGCESLE VVPDDLLGGI TTLKQLYLIS CSSLRSFPYP  780
GSLTSLYIRN CRRLEFLPSA VSRKRLPFLH HLSIGSSCDS VTTLPLNIFC QLKSLCIWDC  840
LNLGSFHFTG EPRGDLTSLE SLEIRECPIL ESFPEEGLHA PRLASILLSN CKNLKKLPNA  900
MNSLVSLKSL FLHRCPQIES FPLGGLPSNL VFLSIAYCDK LTPQKDWGLY SLECLSYFEL  960
EGGCIGMESF PEENLLPCNI ISLHISTLKS LKILDCKGFQ HLNALQTLEI HCCDMLQSLS  1020
NHGLPSSLEK XXXXVDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C1e-276357017501Disease resistance RPP13-like protein 4
6j5t_F1e-276357017501Disease resistance RPP13-like protein 4
6j5t_G1e-276357017501Disease resistance RPP13-like protein 4
6j5t_L1e-276357017501Disease resistance RPP13-like protein 4
6j5t_O1e-276357017501Disease resistance RPP13-like protein 4
6j5u_A1e-276357017501Disease resistance RPP13-like protein 4
6j5v_A1e-276357017501Disease resistance RPP13-like protein 4
6j5w_A1e-276357017501Disease resistance RPP13-like protein 4
6j6i_C1e-276357017501Disease resistance RPP13-like protein 4
6j6i_F1e-276357017501Disease resistance RPP13-like protein 4
6j6i_G1e-276357017501Disease resistance RPP13-like protein 4
6j6i_L1e-276357017501Disease resistance RPP13-like protein 4
6j6i_O1e-276357017501Disease resistance RPP13-like protein 4
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.DZ0GE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025642938.10.0putative disease resistance protein At3g14460
TrEMBLA0A445A7460.0A0A445A746_ARAHY; Uncharacterized protein
STRINGXP_004513271.11e-142(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-12bHLH family protein