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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aradu.DP2D5 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
bHLH |
| Protein Properties |
Length: 266aa MW: 29603.6 Da PI: 7.1987 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.DP2D5 | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 37.6 | 3.9e-12 | 78 | 123 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h ++Er RR++i + f L l+P + kK++Ka++L A++Y+k+Lq
Aradu.DP2D5 78 HIIAERMRREKISQQFIALSALIPGL-----KKMDKATVLGDAIKYVKQLQ 123
899***********************.....9******************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MISTEESWTT WLCDLEEEDY SFINGIIAAP NNYSNSQMSN NDNERPSKLL KSTTPTPRRR 60
RTTGSAGTGR SPQHAHDHII AERMRREKIS QQFIALSALI PGLKKMDKAT VLGDAIKYVK 120
QLQEQVKVLE TESKRKSAES VVYVEKSEVC GEEDVSVSDT WSNSGGDGNS SYEVSKAVSR 180
SVLPEVEARV SEKNVLIRIH CEKHKGVLMH ILKLIDKLHL SVLNTTSLPF GASIVDITIT 240
AEMDDKFSLS AKELARNIRV GVLQSM
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5gnj_A | 1e-13 | 77 | 151 | 8 | 80 | Transcription factor MYC2 |
| 5gnj_B | 1e-13 | 77 | 151 | 8 | 80 | Transcription factor MYC2 |
| 5gnj_E | 1e-13 | 77 | 151 | 8 | 80 | Transcription factor MYC2 |
| 5gnj_F | 1e-13 | 77 | 151 | 8 | 80 | Transcription factor MYC2 |
| 5gnj_G | 1e-13 | 77 | 151 | 8 | 80 | Transcription factor MYC2 |
| 5gnj_I | 1e-13 | 77 | 151 | 8 | 80 | Transcription factor MYC2 |
| 5gnj_M | 1e-13 | 77 | 151 | 8 | 80 | Transcription factor MYC2 |
| 5gnj_N | 1e-13 | 77 | 151 | 8 | 80 | Transcription factor MYC2 |
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