PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.D69CU
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 279aa    MW: 30985.5 Da    PI: 8.0661
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.D69CUgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.2e-10856254
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +  +  rE+ RRdr+N+ f eL ++l ++     +K++Ka+iL  +++ +k+L
  Aradu.D69CU  8 KSQKADREKIRRDRLNEQFVELGSILDPD----RPKNDKATILGDTIQLLKDL 56
                 677889********************997....79**************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-14475IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-13578IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.37656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.79E-7760No hitNo description
PfamPF000106.0E-8756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.2E-81262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MDGTAARKSQ KADREKIRRD RLNEQFVELG SILDPDRPKN DKATILGDTI QLLKDLTSQV  60
GKLKDEYAAL NEESRELAQE KNDLREEKAS LKTDIENLNN QYQQRLRNMF PWTAMDHSVM  120
MAPPSYPYPM PMAVPPGSIP LQPYPFFANQ NPSVIPNPCS TFVPYLAPNT LVEQQSAQYV  180
SPPSHPGTRS HLSSKHDTRN KPPRDRESKA EKSEASNDVT TNLELKTPGS SADQDLSSGK  240
RKCSKPLRSE GSSLGRCSSS HSVQDSSSSS VDGSRKANE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.D69CU
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150392e-47AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015952688.10.0transcription factor bHLH121 isoform X1
RefseqXP_016187906.10.0transcription factor bHLH121 isoform X1
RefseqXP_025642681.10.0transcription factor bHLH121
RefseqXP_025686803.10.0transcription factor bHLH121
SwissprotQ9LT234e-94BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A445A7S90.0A0A445A7S9_ARAHY; Uncharacterized protein
STRINGXP_007133432.11e-146(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.19e-81bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]