PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.CU097
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 358aa    MW: 41267.3 Da    PI: 4.6188
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.CU097genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.8e-07131180248
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 
                      + WT eE + +  + +    +    +W+t+a++++ g+t+ q+++r++k++
      Aradu.CU097 131 QVWTWEENKAFESVMANCFQDsiysRWETVAARLP-GKTPAQLQERFLKLM 180
                      68****************999**************.************986 PP
2Myb_DNA-binding36.98.7e-12288331347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT +E++l++++ ++lG+  W++I+++  k+Rt  q++s+ qk+
      Aradu.CU097 288 HWTLQEHKLFLQGYEELGKQ-WSRISSEYVKTRTYSQVVSHSQKF 331
                      6*****************99.********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.59E-7127187IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.7E-5129180IPR009057Homeodomain-like
SMARTSM007170.0026129182IPR001005SANT/Myb domain
PfamPF002491.8E-5131179IPR001005SANT/Myb domain
CDDcd001672.39E-4133180No hitNo description
PROSITE profilePS500906.725133180IPR017877Myb-like domain
PROSITE profilePS5129414.048281336IPR017930Myb domain
SuperFamilySSF466892.8E-12282337IPR009057Homeodomain-like
TIGRFAMsTIGR015577.3E-11285335IPR006447Myb domain, plants
SMARTSM007173.4E-7285334IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.6E-7288326IPR009057Homeodomain-like
PfamPF002491.5E-8288330IPR001005SANT/Myb domain
CDDcd001671.48E-4289327No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MIAEEIDDAA IIEEELNALL TMDAKEMMED LFALDLEDNQ QHSWDNTLSN MDMEDNPEKM  60
KEELDALFMM EETEATKHSQ SQLQPHTTTI EEQCAIEVDQ FFNDTWGYQP QLEMIAAVGG  120
HQPLQSQQQP QVWTWEENKA FESVMANCFQ DSIYSRWETV AARLPGKTPA QLQERFLKLM  180
TEVNAIKNSY PENMNIMIPL PATPLEHSPL FIPIVNATPP PPPPHWTNHQ HPRMEAMAPA  240
ADTALPMHIT LLSSSMSGEQ NQHANSNIIQ HEPLPASNDN NKRQQTVHWT LQEHKLFLQG  300
YEELGKQWSR ISSEYVKTRT YSQVVSHSQK FFKRQERRAR GENLKKSILD ITDYRTIA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.CU097
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445EIG20.0A0A445EIG2_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.13e-19Homeodomain-like transcriptional regulator