PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.C7X7Y
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 285aa    MW: 32897.9 Da    PI: 7.8335
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.C7X7YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.81.3e-1688178190
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fY +YAk+vGF +r+++++     k+++  +++ +  s+eg++e++ k+   + r +  t  gCk ++ v +++ +++w+v+klel+H+H+++
  Aradu.C7X7Y  88 EFYTNYAKKVGFVTRIRNTNFDktrKDSKIPVNQSLHYSREGYQESRVKA---ATRVKRITTAGCKVRMYVMLDRqKDNWMVSKLELKHTHPCF 178
                  6*************999887664435555568999************999...888889999**********9998***************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.4E-1488177IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MEQAICEGAS YGTAYDDSDQ YNSCDVNVPS LSEDDTQHVD KEKDFGSVIE AVDDAMAVNH  60
ELPDHTGISL DKIPYVGLRF VSLQRAQEFY TNYAKKVGFV TRIRNTNFDK TRKDSKIPVN  120
QSLHYSREGY QESRVKAATR VKRITTAGCK VRMYVMLDRQ KDNWMVSKLE LKHTHPCFAK  180
QAVHYTEYRK LTMHAKCMRS TQWSESMHTF YGGYLHCKSG LVQFMHEYDN VLGNKQQKEL  240
EDDAADSKGV VPCSSSTTIE RQFQREYTTS KFREVQQEFR KNGIV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.C7X7Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020966746.11e-129protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZPS21e-130A0A444ZPS2_ARAHY; Uncharacterized protein
TrEMBLA0A444ZPS51e-125A0A444ZPS5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2928222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-12FAR1 family protein