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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.BWE0N | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 534aa MW: 59860.8 Da PI: 6.607 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.5 | 3.7e-30 | 306 | 365 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ +d +++++tYeg+Hnh+ Aradu.BWE0N 306 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCIDDMSILITTYEGTHNHP 365 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.0E-32 | 291 | 367 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.11E-28 | 299 | 367 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.207 | 301 | 367 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.7E-37 | 306 | 366 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.9E-27 | 307 | 365 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 534 aa Download sequence Send to blast |
AKSRQRKLKR EILAIKSSVL CSTMSSKGKE PQNMMDIDLS LKIDHIENNK DGEATPPKVV 60 ASVKEDLKNK KKEETKALNI NKEDFLEAAA GEIEDELPSQ DNTKARELSV LQMEMESMKE 120 ENKVLRKVVE QTMKDYYDLQ LKFSIIQENN NNKNKSKDHE ISLSLHREEN ATIRKLHDEE 180 GPRRIHHYQD EMFKFNNKIE KASSLANTDC GESLISESEL GLSLRLETST RKKEKEIDDE 240 EDQKQEEEEE EEEEEEEEKK TQPANFASSS AATKLQRTHH HAFHAASPPN RKARVSVRAR 300 CEAATMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCIDD MSILITTYEG 360 THNHPLPVGA TAMASSAAAS FMLLDSSTFN VNHQQPLLLN PNPNNKGVVL DLIANEASSS 420 LRYPGLSWMQ NNNHHQKAPA SRGIIMEHGE ESKAVVDDMV KVSAIASDPK FRVAVAAAIT 480 SFINNNNKDH AIGATSFAAN SSSNSRTTAN NTNNNWILDN NNNNNHSLSK DANP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-22 | 293 | 369 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.BWE0N |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015957510.1 | 0.0 | probable WRKY transcription factor 9 | ||||
Refseq | XP_025691289.1 | 0.0 | probable WRKY transcription factor 9 isoform X1 | ||||
TrEMBL | A0A444ZT60 | 0.0 | A0A444ZT60_ARAHY; Uncharacterized protein | ||||
STRING | XP_007159029.1 | 1e-143 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9320 | 31 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 9e-56 | WRKY DNA-binding protein 9 |