PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.B5XXI
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 405aa    MW: 45712.6 Da    PI: 6.8146
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.B5XXIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM92.66.7e-29501801128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgy 82 
                  lp+G++F+Ptd+el+ e+L++kve+k+++ +        +i+   +i++++P++Lp  +             +k+y+tg+rk+r+          + +
  Aradu.B5XXI  50 LPAGVKFDPTDQELI-EHLEAKVESKNMKSHPlidefipTIEGEdGICYTHPEKLPG-M------------PSKAYTTGTRKRRKiqnecdlqGGETR 133
                  799************.99*********5553344444434666646**********2.2............223333333333331222221145778 PP

          NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                  W++tgk+++v++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  Aradu.B5XXI 134 WHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 180
                  ************.999***********5547999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-3445199IPR003441NAC domain
PROSITE profilePS5100528.59950199IPR003441NAC domain
PfamPF023651.3E-1451180IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MNNNKISNMS SVSSSDLIDA KLEEHQLCGG SKQCPGCGHK FESKPDWLGL PAGVKFDPTD  60
QELIEHLEAK VESKNMKSHP LIDEFIPTIE GEDGICYTHP EKLPGMPSKA YTTGTRKRRK  120
IQNECDLQGG ETRWHKTGKT RPVMVNGKQK GCKKILVLYT NFGKNRKPEK TNWVMHQYHL  180
GQHEEEKEGE LVVSKIFYQT QPRQCNWSSD RSATTTIATA EGSGEPLQNS RRDSGSGSCS  240
SKEINIGHKD EMSAVVGVTN TPITGFAHPL DIHHHLKSDH FSFIPFRKSF DEVGIGEAST  300
AREVQASGSC DEVVHEHVNH HHQQQQQHHH HHQIXXXXXH PISTLISPPP LHHTSIILDD  360
NSYQVSRIML QNEHFQESSI TNPQEAEWLK YSSYWPDPDN PDHHG
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00460DAPTransfer from AT4G29230Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.B5XXI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150444e-55AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015966433.10.0NAC domain-containing protein 73 isoform X2
SwissprotQ9M0F81e-147NAC75_ARATH; NAC domain-containing protein 75
TrEMBLA0A151T2Y20.0A0A151T2Y2_CAJCA; NAC domain-containing protein 8
TrEMBLK7L4P90.0K7L4P9_SOYBN; Uncharacterized protein
STRINGGLYMA01G00880.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45203458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-142NAC domain containing protein 75
Publications ? help Back to Top
  1. Droc G, et al.
    OryGenesDB: a database for rice reverse genetics.
    Nucleic Acids Res., 2006. 34(Database issue): p. D736-40
    [PMID:16381969]
  2. Sakamoto S,Mitsuda N
    Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant.
    Plant Cell Physiol., 2015. 56(2): p. 299-310
    [PMID:25535195]