PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.B2KP3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 531aa    MW: 61498.3 Da    PI: 9.8471
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.B2KP3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.28.7e-1622108190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  +fY++YAk+vGF ++++ +++  +++  +++  +C++egk +++ +     ++t++  + +C a++ ++++k+g   ++k+ l+H+H++ 
  Aradu.B2KP3  22 QFYQNYAKRVGFVTKIRFTRRVGKDKVPKNQIITCNREGKCKSRVSL---IEKTNPRINYNCPARISIRLNKEGIRIISKVCLDHSHPCD 108
                  6*************************9****************9888...899999*******************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.4E-1322108IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    Send to blast
MEFKKDVPKV GMCFGTIEDA NQFYQNYAKR VGFVTKIRFT RRVGKDKVPK NQIITCNREG  60
KCKSRVSLIE KTNPRINYNC PARISIRLNK EGIRIISKVC LDHSHPCDPE IAKLLTRNRE  120
MSMHMCRVIE RNDEAGVRPS KTYQVLMGEA RDIYEERHRW VSIFLDNFFW AGMRSTQQTE  180
SMHSYFDKFL NNKSLLIQFK EQQEREADVE DYKSIIPCAT NSLIEKQFQS AYTNAKFKEV  240
QKQIRKKANC ILHLMKAVST SKVYSILEDV SNSKERVYEV NYNAKTKDIT CKCQMFESRG  300
ILCSYSLVVL GNEHVREISR RYILDRWSKL VKRRHSDIKS SHDPSLLNLK TEKFDDLCSH  360
SNNVAQFASQ TKETSDILHR YLDMAMSECQ KHIANSSSNA NELDNLLTLE DGGKDALSIF  420
VGGCIISIQN IKSPPYVSSK GRSTNRLRSE KDKMIKKKTE AKKRKNFRCR NYFLKNNQHI  480
GNSQSLPFNK QLQDANYHVN EGFESDSMGG SIGRFMSLLN SIHSYKFSNV D
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.B2KP3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015933229.10.0uncharacterized protein LOC107459516
TrEMBLA0A444XQD30.0A0A444XQD3_ARAHY; Uncharacterized protein
TrEMBLA0A445B5410.0A0A445B541_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.23e-27far-red elongated hypocotyls 3