PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.AU0UC | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 114aa MW: 13411.1 Da PI: 9.5152 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 30 | 1.7e-09 | 49 | 108 | 1 | 60 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrt 60 +fY++ +k GF +r+ + k ++g+ ++r+f C++eg+r++++ + +++r +++etrt Aradu.AU0UC 49 EFYKRLGKFYGFGIRRGDMFKD-EKGNLVRRRFFCNREGQRDKKHYNrIDRKRPHKPETRT 108 6*****************9998.7777****************999943444445666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 4.5E-7 | 49 | 108 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence Send to blast |
MDVPEAVDIN AMCEEGAGVM GAVDFGDVAD ITENDILRKV FRSEDDAYEF YKRLGKFYGF 60 GIRRGDMFKD EKGNLVRRRF FCNREGQRDK KHYNRIDRKR PHKPETRTIS RRQG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.AU0UC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020981435.1 | 4e-69 | protein FAR1-RELATED SEQUENCE 5-like | ||||
Refseq | XP_020989561.1 | 6e-69 | protein FAR1-RELATED SEQUENCE 5-like | ||||
Refseq | XP_025609953.1 | 4e-69 | protein FAR1-RELATED SEQUENCE 5 isoform X2 | ||||
TrEMBL | A0A445CEJ4 | 2e-72 | A0A445CEJ4_ARAHY; Uncharacterized protein | ||||
TrEMBL | A0A445CEL7 | 2e-71 | A0A445CEL7_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15343 | 2 | 10 |