PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.AS6JW
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 276aa    MW: 31775.9 Da    PI: 8.285
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.AS6JWgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.91.4e-1751137191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r+++++++   +ei+++  +Cs+egk +++ +    +++ + +   +C a++ ++  k  g w ++k+ l+H+H+++p
  Aradu.AS6JW  51 KFYRNYAKAAGFSTRVRSTNRK--GNEIKNQLITCSREGKWKSKISL---TKKMNLTAGLNCPARIYIHTLKdIGAWIISKVMLDHSHPCCP 137
                  6****************98887..8889**************99887...8999999***********998879***************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.1E-1551137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MDDSTSDCQL NQGKVDYEFE SNEVPDPLSV VDDQFVPKVG MTFTTLEDVE KFYRNYAKAA  60
GFSTRVRSTN RKGNEIKNQL ITCSREGKWK SKISLTKKMN LTAGLNCPAR IYIHTLKDIG  120
AWIISKVMLD HSHPCCPSKA EMLKQHKELS MSIRRTIENN EEAGIRPSKT YQSFVAAAED  180
RHIWVPIYLD HHFWAGMRRT QRSESMHSFF NKFITQNSSL IQFVKQYDNC LGSREQAERE  240
SNAADFHTVI PCATKSSIEA QFQDVYTHQK FREVQA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.AS6JW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997160.11e-115protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997266.11e-114protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZZ110.0A0A444ZZ11_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-13FAR1-related sequence 5