PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.AE9WN

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 235aa MW: 26129.1 Da PI: 9.7132

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.AE9WN	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.2	2.5e-12	54	100	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRRdriN + Lr+l+Pk+ K++Ka+ L ++e +k+L Aradu.AE9WN 54 KSHSQAEKRRRDRINAQLTSLRKLIPKS-----DKMDKAALLGSVIEQVKDL 100 79***********************8.....7***********99988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	14.78	51	100	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.93E-12	52	103	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.4E-10	54	100	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	8.55E-9	54	103	No hit	No description
Gene3D	G3DSA:4.10.280.10	7.3E-14	54	103	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.2E-9	57	106	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:3.30.70.260	4.0E-4	144	191	No hit	No description
CDD	cd04873	3.68E-5	144	193	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence Send to blast
MENYDHCSLF LDPSQTLPHV SDCNSLHHQF GGEFHSWPAP VEMVAGDRAA SASKSHSQAE 60 KRRRDRINAQ LTSLRKLIPK SDKMDKAALL GSVIEQVKDL KRKAIEVSKA ITVPTESDEI 120 TIEYDPSARD ESLKMKNKVV IKASVCCDDR PELFSELIQV LKGLRLTAVR ADIASVGGRM 180 KGTFLLCSKD NEKVVCLGTL KHSLKSVVTK IASSSIATNW PTRSKRQKSI LKTEW

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.AE9WN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015944288.1	1e-168	transcription factor bHLH51-like
Refseq	XP_025625849.1	1e-168	transcription factor bHLH51-like
TrEMBL	A0A445B8C7	1e-167	A0A445B8C7_ARAHY; Uncharacterized protein
STRING	XP_007163561.1	1e-105	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5796	33	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	2e-50	bHLH family protein