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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Aradu.9YL2F |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family |
Trihelix |
Protein Properties |
Length: 294aa MW: 35734.1 Da PI: 6.3665 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Aradu.9YL2F | genome | NCGR_PGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 78.4 | 1.1e-24 | 45 | 127 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+ qe+++ + +r e+++++ ++k++k+lW+ +s++m+e+g++rs++qCk+kw+nl +ryk ++++e + ++++p++++++
Aradu.9YL2F 45 QWSIQETKEFLMIRAELDQTFMETKRNKQLWQVISNNMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEPEA---MRQQFPFYNEIQ 127
7********************************************************************95...55689****997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MEGHHQHHQQ PQQHLLQQIL LPHHQQQNMI INVDGGGGIS DRFPQWSIQE TKEFLMIRAE 60 LDQTFMETKR NKQLWQVISN NMKEKGYHRS AEQCKCKWKN LVTRYKGCET MEPEAMRQQF 120 PFYNEIQAIF TSRSMQRMLW GEGEGTSKKN KPMQFSSEEE EEEDNDEESE EHQKGSTRMR 180 RKKKKAKISS GNNKNSGDFL NNLKEILEEF MRQQMQMEAQ WMEAFESREK ERRMKEMEWR 240 QTMEALENER IMMDQRWRER EEQWRVREEV RAQNRDELIT TLLHKLQQQS EDDF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specifically to the core DNA sequence 5'-GTTAC-3'. {ECO:0000269|PubMed:15044016}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 7e-50 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |