PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.9QI8Z
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 99aa    MW: 11472.2 Da    PI: 10.2206
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.9QI8ZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.31.6e-102601067
         FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklk 67
                  GF  r+sk k++  ng +t++ fvC  eg+re++  +  +++++++++etr gC+a++ 
  Aradu.9QI8Z  2 NGFAARRSKLKRN-VNGDVTQQSFVCFGEGFRETKFYDesSQRKHEPKSETRYGCQAEML 60
                 59*******9998.8888***************9977744667777999*********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-7261IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
MNGFAARRSK LKRNVNGDVT QQSFVCFGEG FRETKFYDES SQRKHEPKSE TRYGCQAEML  60
RNHELLADKL TFMLPRHRKM DAGGIDQMNM MLKVGIKTP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1612RRSKLKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.9QI8Z
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020982272.16e-48protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A444X5Y42e-43A0A444X5Y4_ARAHY; Uncharacterized protein
TrEMBLA0A444YCY62e-43A0A444YCY6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3613639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.13e-06FAR1-related sequence 10