PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.9Q4WD
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 527aa    MW: 57544.3 Da    PI: 5.9204
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.9Q4WDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.41e-1759145191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.9Q4WD  59 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 145
                  6***************998776..8889*************998877...8999**************998879***************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.7E-1559145IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MDHSTSDCQL NPGEVNYEFE SNEVPEVYYI RHDWPLSVVD DELVPKVGMT FTILEDAEKF  60
YRNYAKAAGF STRVRCTNRK GNEIKNQLIT CSREGKWKSK ISPTEKTNPT AGLNCPARIY  120
IHTLKDVGAW IISKVVLDHS HPCCPSKAEM LKQHRELSMS IRRTIENNEE AALWVEKILQ  180
ELKVSISPIE GRIALPIILP RTSSSSTLRP ARNWNILPSS TRLVTEDRGG AIVHSARGDP  240
AVPETVGAFT GALEGEALSD GAGGHDDGIG HEGFGISENG KRTLREIYLR DGLREDLGAE  300
SLRLLAAAFH ELTAEDAVRE AGEVLDVGCR GELASGGDVV GHPSFEEDWF ELGASGVDGG  360
SVGGRTASYD AELGFEGAHE YAAALAVVVE AWRRTVTTSP GTARLFSSSN NTIIASEAGS  420
KQRESDAADF HTVIPCSTKS SIEAQFQDAY THAKFREVQA QFRGKANCIT RLKNSALGYS  480
IYDVGEQVSS SIFNKFAVTY DSVTAERDTV PSRTKRVKLR TSKPSVS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.9Q4WD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-176HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A444ZXU61e-116A0A444ZXU6_ARAHY; Uncharacterized protein
TrEMBLA0A445A2R81e-116A0A445A2R8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.16e-10FAR1 family protein