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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.9L7NB | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 344aa MW: 38767.3 Da PI: 6.2375 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.6 | 1.7e-30 | 222 | 281 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ +d +++++tYeg+Hnh+ Aradu.9L7NB 222 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLDDMSILITTYEGTHNHP 281 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 9.3E-33 | 207 | 283 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.24E-27 | 216 | 283 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.103 | 217 | 283 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.0E-37 | 222 | 282 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.5E-27 | 223 | 281 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence Send to blast |
MKTDLSLQID AEQEQENKLE YDVDVEEEMK QTQLQLEAGE IEEHVVSLQD NKNYKTREQE 60 EDLNVLQMEM DRIKEENQAL RKLVEQTMKD YYDLQMKISN NYNNKNNKDL EISVQRASPT 120 IHDDDDELSL SLRLNNTSST SWRIHQQERV TDNIINEKLI SSFASSSSSP PLQNKLIIRG 180 TTNDDTAITT HHHHHLSAAA STTTPNRKPR VSVRARCEEA KMNDGCQWRK YGQKIAKGNP 240 CPRAYYRCTV APGCPVRKQV QRCLDDMSIL ITTYEGTHNH PLPVGATAMA ATASAPASFT 300 LSHGVSASQP HFPWITNNNN VSAIASDPNK FKVAVAAAIT TLFT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-22 | 222 | 285 | 14 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.9L7NB |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015943356.1 | 0.0 | probable WRKY transcription factor 9 isoform X1 | ||||
Swissprot | Q9C9F0 | 1e-67 | WRKY9_ARATH; Probable WRKY transcription factor 9 | ||||
TrEMBL | A0A445BA84 | 0.0 | A0A445BA84_ARAHY; Uncharacterized protein | ||||
STRING | XP_007159029.1 | 3e-83 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9320 | 31 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 2e-53 | WRKY DNA-binding protein 9 |