PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.9C8PR

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 447aa MW: 48652.6 Da PI: 4.5356

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.9C8PR	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.8	1.2e-05	329	366	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L Aradu.9C8PR 329 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 366 677888999*****998.....8**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.973	317	366	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.7E-11	327	379	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.03E-5	327	370	No hit	No description
Gene3D	G3DSA:4.10.280.10	8.4E-9	331	374	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence Send to blast
MAEEFQATIC GDNYWWNSNK SLFSLMGGSM TCSVAAANDS ANNYDSFWQG SDFMDFKGAT 60 TKSSFKGEDT NKCSNNESST SASAVAGGTV GSIFINSTSQ MMSDGLSSSP SFTWNNPSLF 120 GCNERSENNF QSIVIQEETG LDPSNNNSQQ IQQQQEFSNS MGSGFTIESS LSASYDYPLM 180 QAGLFGSTDS SSSLFTTNQP TLPELSPIWS TVSSFMKPSS FMEPKQLNGL QFSNNTPFCN 240 ASTEETLYSI RSDIFSSSSS QPQLYQTPPT TFDNSKPNNA LTSTPLNKLK REESPEKASS 300 SVCSKNVSGR VFKKTRIETP SPLPTFKVRK EKLGDRITAL QQLVSPFGKT DTASVLHEAI 360 EYIKFLHDQV NVLTAPYMKN GSSIQDQQGC DYEKDSKCLT QDLNSRGLCL VPVASTFPMA 420 TETTADFWTP TFGNSLIGNV AVAGSHQ

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence Send to blast

MAEEFQATIC GDNYWWNSNK SLFSLMGGSM TCSVAAANDS ANNYDSFWQG SDFMDFKGAT  60
TKSSFKGEDT NKCSNNESST SASAVAGGTV GSIFINSTSQ MMSDGLSSSP SFTWNNPSLF  120
GCNERSENNF QSIVIQEETG LDPSNNNSQQ IQQQQEFSNS MGSGFTIESS LSASYDYPLM  180
QAGLFGSTDS SSSLFTTNQP TLPELSPIWS TVSSFMKPSS FMEPKQLNGL QFSNNTPFCN  240
ASTEETLYSI RSDIFSSSSS QPQLYQTPPT TFDNSKPNNA LTSTPLNKLK REESPEKASS  300
SVCSKNVSGR VFKKTRIETP SPLPTFKVRK EKLGDRITAL QQLVSPFGKT DTASVLHEAI  360
EYIKFLHDQV NVLTAPYMKN GSSIQDQQGC DYEKDSKCLT QDLNSRGLCL VPVASTFPMA  420
TETTADFWTP TFGNSLIGNV AVAGSHQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.9C8PR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015943476.1	0.0	transcription factor bHLH112
TrEMBL	A0A445BB19	0.0	A0A445BB19_ARAHY; Uncharacterized protein
STRING	XP_007148280.1	1e-118	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1118	33	106

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.3	4e-50	bHLH family protein