PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.98PBH

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 390aa MW: 44685 Da PI: 9.7949

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.98PBH	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.3	1.4e-24	215	304	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y +Y++++GF+vr++++++s+ n++++ ++fvCskeg+r+++ +++++ + + tr gC+a++++ +++ gkw+vtk+++eH+H+l+ Aradu.98PBH 215 LYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPATREGCQAMIRLALRDGGKWVVTKFVKEHTHKLM 304 799*************************************99883333.2448899*****************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.4E-21	215	304	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence Send to blast
MRSRVAVEVR AVTSHEFLLG RRSHGYDGRG GGVFHLRRDV PARQHQLQQV AVVVTVRTRH 60 LTLTASHRSF APPGVCPYNK VKGVPVGGTN PRFEFQLKKE GGIRKLINPT RFNFSIFIIV 120 WVFGALILPA SVLSRVMDHQ SGQGFDSDDS DLDIQVEISR RLGKVEDGFP KDMELCAGEE 180 DKFIEQSVAD ISADGEALEP FIGMEFNSRE EARELYIAYG RRIGFTVRIH HNRRSRVNNQ 240 VIGQDFVCSK EGFRAKKYVH RKDRVLPPPP ATREGCQAMI RLALRDGGKW VVTKFVKEHT 300 HKLMSPSKVP WRGSGKHLVS EDEKDKRIRE LSLELYNERQ KYKRRCAAYE EQLNNILNYL 360 EKHTEHMSEK VADIVRSIRE IEEEKTDSDI

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence Send to blast

MRSRVAVEVR AVTSHEFLLG RRSHGYDGRG GGVFHLRRDV PARQHQLQQV AVVVTVRTRH  60
LTLTASHRSF APPGVCPYNK VKGVPVGGTN PRFEFQLKKE GGIRKLINPT RFNFSIFIIV  120
WVFGALILPA SVLSRVMDHQ SGQGFDSDDS DLDIQVEISR RLGKVEDGFP KDMELCAGEE  180
DKFIEQSVAD ISADGEALEP FIGMEFNSRE EARELYIAYG RRIGFTVRIH HNRRSRVNNQ  240
VIGQDFVCSK EGFRAKKYVH RKDRVLPPPP ATREGCQAMI RLALRDGGKW VVTKFVKEHT  300
HKLMSPSKVP WRGSGKHLVS EDEKDKRIRE LSLELYNERQ KYKRRCAAYE EQLNNILNYL  360
EKHTEHMSEK VADIVRSIRE IEEEKTDSDI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.98PBH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020984755.1	0.0	protein FAR1-RELATED SEQUENCE 3 isoform X1
TrEMBL	A0A371H920	1e-159	A0A371H920_MUCPR; Protein FAR1-RELATED SEQUENCE 5 (Fragment)
STRING	XP_007150429.1	1e-157	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8861	30	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	6e-39	FAR1 family protein