PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.8BE3R

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 98aa MW: 11068.3 Da PI: 8.1942

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.8BE3R	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.2	1.2e-08	61	98	1	40
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40 kfY++YAk +GFs+r+ +++++ ++ei+++ +Cskegk Aradu.8BE3R 61 KFYRNYAKAAGFSTRVWSTNRK--ENEIKNQLITCSKEGK 98 6*************998877..7779********97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	8.2E-6	61	98	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 98 aa Download sequence Send to blast
MDDSTSDCQL NQGEVNYNLN LTKFLRRSGV DQNFLGPVSV VDDQFVSKVG MTFTTLEDAG 60 KFYRNYAKAA GFSTRVWSTN RKENEIKNQL ITCSKEGK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.8BE3R

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-64	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020982377.1	1e-36	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445EQ24	2e-43	A0A445EQ24_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477