 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Aradu.83N8C |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
Family |
bHLH |
Protein Properties |
Length: 348aa MW: 38629.1 Da PI: 7.1276 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Aradu.83N8C | genome | NCGR_PGC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.1 | 1.3e-12 | 197 | 244 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq
Aradu.83N8C 197 QDHVIAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 244
6799************************.....9******************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MMQISSTNKY LPEFGMDESV FFHNQYPMMD SSTITSSPSP WPQILDDIDF NQIQESFSSA 60 SSPKSYTSNK RFNSSSAAGT TMPQSSFSPI ERPTKQQKNA YSHGISTNTT TTTSNEFMHS 120 NASSSVASYN HRHQQLYNNN PSSDQGNHVL RPKTESVCSE NLDFATVVSH ADYLSGYDKA 180 NKGSAAAATT RNPTQAQDHV IAERKRREKL SQRFIALSAI VPGLKKMDKA SVLGDAIKYL 240 KQLQEKVKIL EEQVAEKTVE SAIFVKRSIL FAEDNGSSSE ENPDQKIPEI EARISGKDVL 300 IRIHCDKHSG IVPKIINEIE KHDLSVQSSS FLPFGNNSLD ITIVAQRI
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 2e-13 | 198 | 253 | 8 | 63 | Transcription factor MYC2 |
5gnj_B | 2e-13 | 198 | 253 | 8 | 63 | Transcription factor MYC2 |
5gnj_E | 2e-13 | 198 | 253 | 8 | 63 | Transcription factor MYC2 |
5gnj_F | 2e-13 | 198 | 253 | 8 | 63 | Transcription factor MYC2 |
5gnj_G | 2e-13 | 198 | 253 | 8 | 63 | Transcription factor MYC2 |
5gnj_I | 2e-13 | 198 | 253 | 8 | 63 | Transcription factor MYC2 |
5gnj_M | 2e-13 | 198 | 253 | 8 | 63 | Transcription factor MYC2 |
5gnj_N | 2e-13 | 198 | 253 | 8 | 63 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 202 | 207 | ERKRRE |
2 | 203 | 208 | RKRREK |