PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.80M4I
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 284aa    MW: 32365.2 Da    PI: 5.5079
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.80M4IgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.62.6e-1570136167
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklk 67 
                  +fY +Y+k+ GFs rksk+ k+   gei+k++fvC ++g+ree+  + +++++++r etrtgC+a+++
  Aradu.80M4I  70 DFYLKYSKSKGFSARKSKTFKN-SIGEIYKQKFVCHRQGFREEKYYTmEKRKNEPRLETRTGCEARMM 136
                  6*****************9998.7788****************99985566667999*********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.3E-1370136IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MMDEQNEFEQ DFGDEFTEGA YFSESGQSED ILEAAFTVDS VQDITTLNFT ENCAEKIGKY  60
HFSTLQLAFD FYLKYSKSKG FSARKSKTFK NSIGEIYKQK FVCHRQGFRE EKYYTMEKRK  120
NEPRLETRTG CEARMMESFG IPCEHIVKVL VERDICEILP SLVLDRWTKK VKSALNDPSG  180
FTRDFVVISR QSALMKFSKQ LAAVAAKSGV AKSSNPYVHQ TTGGSGQSSK KKRQRCSVCQ  240
MEGHKKTTCP WQRDIDNNVI EDEANDSDDG DMYTEATAEL DSDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229234KKKRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.80M4I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015934392.14e-88protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445EH921e-116A0A445EH92_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2352322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.16e-07FAR1-related sequence 10