PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.7K34L
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 189aa    MW: 21980.7 Da    PI: 10.0976
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.7K34LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.53.9e-1252137190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  kfY++Y+k + Fs+++++++++   ++i+++  +Cs+e k +++ +    + +t+++  ++C a++ v++ k  g w + k++l+ +H+++
  Aradu.7K34L  52 KFYKDYSKLASFSTKIKNTTRK--GDKIKNQLITCSREEKWKSKISP---TLKTNPSAPINCPARIYVHLLKdIGLWIIFKVVLNDSHSCC 137
                  6****************98776..8889**********999998766...999****************99989*************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.0E-952137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MGKLVERNGD MSSGEFKITS SLLDFNSSRC VVDEQFVPKV RMTFKTLEEV RKFYKDYSKL  60
ASFSTKIKNT TRKGDKIKNQ LITCSREEKW KSKISPTLKT NPSAPINCPA RIYVHLLKDI  120
GLWIIFKVVL NDSHSCCLDR AEMLKQHKEL SMFVCRTIDT MRKSGSDQSY LKIVIYEFQF  180
IWITIFGPR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.7K34L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016206076.16e-75protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DEK31e-101A0A445DEK3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.23e-06FAR1-related sequence 4