PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.7H178
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 474aa    MW: 54721.9 Da    PI: 7.5899
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.7H178genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.22.7e-2945129187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  rW+++e++aLi++r+em+ ++r+ + k+plWe+vs+k+ e g+ers+k+Ckek+en+ k+++++keg++++  ++ +t+++fdqlea
  Aradu.7H178  45 RWPREETMALIKIRSEMDGAFRDISPKGPLWEQVSRKLGELGYERSAKKCKEKFENIYKYHRRTKEGRSGK--RNGKTYRFFDQLEA 129
                  8********************************************************************96..55567*******85 PP
2trihelix1001.9e-31313399187
     trihelix   1 rWtkqevlaLiearremeerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  rW+k+ev aLi++r++++e+l++++  k+plWeevs +m+  g+ rs+k+Ckekwen+nk++k++ke +k++ +e+s+tcpy+++lea
  Aradu.7H178 313 RWPKDEVEALIRLRTQVDEQLQQQQgNKGPLWEEVSTAMKGLGYDRSAKRCKEKWENINKYFKRMKEKNKRK-PEDSKTCPYYHHLEA 399
                  8*********************8543899*****************************************96.9***********985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.49138102IPR017877Myb-like domain
SMARTSM007177.5E-442104IPR001005SANT/Myb domain
PfamPF138376.6E-1944130No hitNo description
Gene3DG3DSA:1.10.10.604.8E-444103IPR009057Homeodomain-like
CDDcd122034.39E-2344109No hitNo description
SMARTSM007177.2E-4310373IPR001005SANT/Myb domain
PfamPF138375.7E-22312400No hitNo description
CDDcd122036.69E-21312378No hitNo description
Gene3DG3DSA:1.10.10.602.1E-4312370IPR009057Homeodomain-like
PROSITE profilePS500907.468312371IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MENSTLPENS IENRKVAVAA AEGDSVSSDG LKGEDGERNS SGANRWPREE TMALIKIRSE  60
MDGAFRDISP KGPLWEQVSR KLGELGYERS AKKCKEKFEN IYKYHRRTKE GRSGKRNGKT  120
YRFFDQLEAL DPHPNNNAVI QDAVPCSVRF PVTAMEHSSS ATSSYSSGGG EDEGEGRRRK  180
KKRRLRLFFE GLMREVLEKQ ESLQRKFMEV LDKCDQDRMA REQAWKTEEL ARIKKERELL  240
AQERSIAAAK DEAVMSFIRK FAENSNNNGA LQFPADNNNH LQEQEKEKEK EKEKDEVGNG  300
INVGNFVHMS SSRWPKDEVE ALIRLRTQVD EQLQQQQGNK GPLWEEVSTA MKGLGYDRSA  360
KRCKEKWENI NKYFKRMKEK NKRKPEDSKT CPYYHHLEAI YSKKPKNNNK LDDNDNDKKN  420
ELKPEELLMH IMNGQEERQQ DPDQDQSSSE DADRDNHNGY QMLDNSPSSI AIMS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175184GRRRKKKRRL
2177182RRKKKR
3177183RRKKKRR
4177184RRKKKRRL
5179183KKKRR
6179184KKKRRL
7179186KKKRRLRL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.7H178
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015945228.10.0trihelix transcription factor GT-2
SwissprotQ391172e-63TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A444X5970.0A0A444X597_ARAHY; Uncharacterized protein
STRINGGLYMA09G19750.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.27e-61Trihelix family protein