PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.7FN1T
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 310aa    MW: 35358.3 Da    PI: 6.1441
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.7FN1TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix926e-29195279186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  rW++ ev+aLi++r++me+++    +k   Wee+s++m + g++rs+k+Ckekwen+nk+yk++  + kkr  ++s++cpyf++l+
  Aradu.7FN1T 195 RWPDVEVQALITLRTSMEQKFHLMGSKVSIWEEISEAMNKMGYHRSAKKCKEKWENINKYYKRTIGSGKKR-RQNSKSCPYFNELD 279
                  8****************************************************************999998.788889******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.12188252IPR017877Myb-like domain
SMARTSM007170.0035192254IPR001005SANT/Myb domain
PfamPF138376.6E-22194280No hitNo description
CDDcd122031.34E-22194258No hitNo description
Gene3DG3DSA:1.10.10.603.9E-4194251IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MSTPSRHRNG QLPEPPDTGG SPSVEEDRLG AGSGHDDGRT QESGSSLDDD DGNDIENSSG  60
SGKHSGMPKR KRKMERRLED FVENMVKKVM EKQEQMHKQL VDMIEKKEKE RVMREEAWKQ  120
QEIERIRKDE EARTQERSRN LALISVIQNL LGHEIQIPQQ AEVSSKGEED EPRHEGEEAN  180
AQKSLGISGE GSNNRWPDVE VQALITLRTS MEQKFHLMGS KVSIWEEISE AMNKMGYHRS  240
AKKCKEKWEN INKYYKRTIG SGKKRRQNSK SCPYFNELDV LYSNGLLNLG NPLSSSTNDV  300
SKIEKEESET
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00552DAPTransfer from AT5G47660Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.7FN1T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015958899.10.0trihelix transcription factor GTL1 isoform X1
TrEMBLA0A445DJ760.0A0A445DJ76_ARAHY; Uncharacterized protein
STRINGGLYMA09G01670.11e-114(Glycine max)
STRINGXP_007147613.11e-114(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111123338
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.12e-51Trihelix family protein