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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.75TXC | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 214aa MW: 24991 Da PI: 9.4938 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 40 | 7.6e-13 | 165 | 198 | 26 | 59 |
EE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 26 rCtsagCpvkkkversaedpkvveitYegeHnhe 59 rCt +C+v+k++er+ +dp+++++tYeg+Hnhe Aradu.75TXC 165 RCTNVKCNVRKHMERAIDDPRAFVTTYEGKHNHE 198 9********************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00316 | 4.4E-11 | 43 | 81 | IPR033391 | Fructose-1-6-bisphosphatase class I, N-terminal |
Gene3D | G3DSA:3.30.540.10 | 3.8E-11 | 44 | 81 | No hit | No description |
SuperFamily | SSF56655 | 1.45E-8 | 45 | 81 | No hit | No description |
SMART | SM00774 | 7.3E-6 | 165 | 199 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.2E-8 | 165 | 198 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 16.8 | 165 | 200 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.63E-10 | 165 | 200 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 3.3E-11 | 165 | 200 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MLQVFPSVEI LRFYEIKEEC DYLISMAKPH MQKLRVVDSE TGTKELEDVI FVKPKQQGKY 60 IIVFDPLDGS SNIESAISIG TKLLKLLLWS ERSPLLPKRR LLKKSEGNRG RRIMRKDYTI 120 SLPSILFMEK KRVEVEQESL TSLSGRYKDF IKDFISIYEL TFTTRCTNVK CNVRKHMERA 180 IDDPRAFVTT YEGKHNHEMP TKNINPDIPS ERDS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.75TXC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A445B3N8 | 1e-82 | A0A445B3N8_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37260.2 | 5e-14 | WRKY family protein |