PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.6Z3S5
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-YC
Protein Properties Length: 222aa    MW: 23865.4 Da    PI: 4.3656
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.6Z3S5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC47.92.9e-15897997
        NF-YC  9 qiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
                 qi+++++  + e+P  r+kki++ d+dv+++s ea  l+s++ elf+  l+ +s   a e+kr+t+    +  av+r +   dfl+d  p
  Aradu.6Z3S5  8 QIQENAESSRPEFPTGRVKKIMRLDKDVNRVSGEALFLVSRSTELFLHFLAEKSARVAIEKKRKTVTIDHLRVAVKRHQpSSDFLLDSLP 97
                 67888888999****************************************************************9986368*****987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471133.42E-19698IPR009072Histone-fold
Gene3DG3DSA:1.10.20.105.1E-201283IPR009072Histone-fold
PfamPF008081.4E-181982IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MAEEEEVQIQ ENAESSRPEF PTGRVKKIMR LDKDVNRVSG EALFLVSRST ELFLHFLAEK  60
SARVAIEKKR KTVTIDHLRV AVKRHQPSSD FLLDSLPLPS QPKNLPPSTA ADRRKADKPA  120
PAGTRRIDQF FRKPEVQVAP VADPEAEAPA EADAEAKDAP EADSEAQAAP VEDPEAEPSA  180
EADAEAKTAP EADSEAQATG AEADAGAEVA AEAEAAVHVD EC
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.6Z3S5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015943745.11e-153DNA polymerase epsilon subunit C
RefseqXP_025622531.11e-153transcription regulator complex subunit bur6
TrEMBLA0A445B9V01e-151A0A445B9V0_ARAHY; Uncharacterized protein
STRINGXP_007163752.13e-57(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111053139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.13e-35nuclear factor Y, subunit C13