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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Aradu.6S06R |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 251aa MW: 28674.7 Da PI: 6.6366 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.6S06R | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58 | 1.6e-18 | 32 | 85 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++ e++ +LA++lgL+ rq+ +WFqNrRa++k
Aradu.6S06R 32 KKRRLNMEQVKALEKSFELGNKLEPERKMQLARSLGLQPRQIAIWFQNRRARWK 85
456899***********************************************9 PP
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| 2 | HD-ZIP_I/II | 129.9 | 1e-41 | 31 | 121 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+k kqlE+dy++Lkr+++a+k++n++L++++++L++++
Aradu.6S06R 31 EKKRRLNMEQVKALEKSFELGNKLEPERKMQLARSLGLQPRQIAIWFQNRRARWKIKQLERDYDQLKRQFEAVKSDNDALHAQNQKLQAQI 121
69**************************************************************************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MSFSGIDLGG VEEGNNNGDE ELSDDGSQIG EKKRRLNMEQ VKALEKSFEL GNKLEPERKM 60
QLARSLGLQP RQIAIWFQNR RARWKIKQLE RDYDQLKRQF EAVKSDNDAL HAQNQKLQAQ 120
ILALKNREAT TESINLNKDT EGSCSNRSEN SSEIKFDIST RTPTTTTTTT TTIVDSPLSS 180
KPFFPSSSSS TRPPHQLFQV SRPEIHLHQC HQQNNNNNNH VVAKEESLSS MFVAMDDQSG 240
FWPWLEQQHF N
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ribone PA,Capella M,Chan RL
Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
J. Exp. Bot., 2015. 66(19): p. 5929-43
[PMID:26136262] - Wang X, et al.
Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
Sci China Life Sci, 2018. 61(1): p. 79-87
[PMID:28887625] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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