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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Aradu.69PE5 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
TALE |
| Protein Properties |
Length: 294aa MW: 33172.6 Da PI: 6.5132 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.69PE5 | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 23.2 | 1.2e-07 | 242 | 275 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54
k +yp+++++++L +++gL+ +q+ +WF N+R +
Aradu.69PE5 242 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 275
469*****************************87 PP
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| 2 | ELK | 25.5 | 3.1e-09 | 196 | 217 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK +L++++++++ ++++E++
Aradu.69PE5 196 ELKIELKQGFKSRIEDVREEIL 217
9*******************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010089 | Biological Process | xylem development |
| GO:0010192 | Biological Process | mucilage biosynthetic process |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MMQEPSLGMM GGGGEMSSAT GSGGEQQQRQ LKAEIATHPL YEQVLAAHVA CLRVATPIDQ 60
LPLIDAQLSQ SHHVLRSYVS QHTLSLSPHD RQDLDNFLAQ YLIVLCTFKE QLQQHVRVHA 120
VEAVMACRDI ENTLQALTGV SLGEGSGATM SDDEDEFQMD FCLDQSSGGG GDDMMGFGPL 180
LPTESERSLM ERVRQELKIE LKQGFKSRIE DVREEILRKR RAGKLPGDTT SVLKNWWQQH 240
AKWPYPTEDD KAKLVEETGL QLKQINNWFI NQRKRNWHSN SQSVTSLKSK RKRM
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 272 | 292 | RKRNWHSNSQSVTSLKSKRKR |
| Functional Description ? help
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| Source |
Description |
| UniProt | May be involved in secondary cell wall biosynthesis. {ECO:0000269|PubMed:15980264}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT1G62990.1 | 1e-160 | KNOTTED-like homeobox of Arabidopsis thaliana 7 |
| Publications
? help Back to Top |
- Srinivasasainagendra V,Page GP,Mehta T,Coulibaly I,Loraine AE
CressExpress: a tool for large-scale mining of expression data from Arabidopsis.
Plant Physiol., 2008. 147(3): p. 1004-16
[PMID:18467456] - Heyndrickx KS,Vandepoele K
Systematic identification of functional plant modules through the integration of complementary data sources.
Plant Physiol., 2012. 159(3): p. 884-901
[PMID:22589469] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - He JB, et al.
KNAT7 positively regulates xylan biosynthesis by directly activating IRX9 expression in Arabidopsis.
J Integr Plant Biol, 2018. 60(6): p. 514-528
[PMID:29393579]
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