PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.66XRP
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 318aa    MW: 34948.1 Da    PI: 8.2395
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.66XRPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.92.4e-54231511128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 
                  lppGfrFhPtdeelvv+yLkkk+++++l++  +i++vd+yk++Pw+Lp+k++ +++ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++ls+  +
  Aradu.66XRP  23 LPPGFRFHPTDEELVVHYLKKKASSSPLPV-AIIADVDLYKFDPWELPSKAAFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSdgN 119
                  79****************************.88***************888899****************************************9888 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++vg+kk Lvfy g+ pkg+kt+W+mheyrl
  Aradu.66XRP 120 KQKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 151
                  889***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-6519192IPR003441NAC domain
PROSITE profilePS5100562.10523192IPR003441NAC domain
PfamPF023652.0E-2824151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MIMVDNSTDS SSGAGDQHHH PQLPPGFRFH PTDEELVVHY LKKKASSSPL PVAIIADVDL  60
YKFDPWELPS KAAFGDQEWY FFSPRDRKYP NGARPNRAAT SGYWKATGTD KPILSSDGNK  120
QKVGVKKALV FYGGKPPKGV KTNWIMHEYR LTDNNNNASS SISSKPPSIP LDPLKKTSLR  180
LDDWVLCRIY KKSNSSSSSL PIPRPAFLMD EEKDLISMEN SMVPTMSMSK PRSTSTTGCY  240
GPMALENDDN FFDGILAAST DHHTMQNGSP GSSSSSKRFH GDLNNGDNTS FVSLLNQLPH  300
NTPFHPNSIL GSVGDAVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-732319720173NAC domain-containing protein 19
3swm_B2e-732319720173NAC domain-containing protein 19
3swm_C2e-732319720173NAC domain-containing protein 19
3swm_D2e-732319720173NAC domain-containing protein 19
3swp_A2e-732319720173NAC domain-containing protein 19
3swp_B2e-732319720173NAC domain-containing protein 19
3swp_C2e-732319720173NAC domain-containing protein 19
3swp_D2e-732319720173NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00058PBMTransfer from AT1G61110Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.66XRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150344e-39AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956312.10.0NAC transcription factor 25-like
RefseqXP_025690050.10.0NAC transcription factor 25
SwissprotQ8GY421e-107NAC25_ARATH; NAC transcription factor 25
TrEMBLA0A445DRC00.0A0A445DRC0_ARAHY; Uncharacterized protein
STRINGXP_007159283.11e-142(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16233498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-100NAC domain containing protein 25