PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.64IL2

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Trihelix

Protein Properties

Length: 365aa MW: 41795.7 Da PI: 4.4068

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.64IL2	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.5	3.1e-12	118	202	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++ + +L+e+ ++ +l+r++l+ +W +v++k+ e + e+s qCk+ +++l++rykk+k ++ s ++++f++++ Aradu.64IL2 118 WSEHATFVLLEVWGDKFLQLGRTSLRSDDWLDVAEKVsDELKAEKSVAQCKSMLDKLKRRYKKEKGKVEEL-GLGSCKWAFFKKMD 202 ***********************************88999*******************988875.78889******7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	7.7E-18	116	204	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence Send to blast
MDDMEDDARY PPKSFPLNRQ NPSHRHKHPI RPPPFHHHNP RYEDQEDDDY DDEEEHAEFE 60 NYGNDVVDNT NNEDDDDDCG NGVQNGYFKK RKVGVGGSPV PTGYEFAPRV KYSYGDDWSE 120 HATFVLLEVW GDKFLQLGRT SLRSDDWLDV AEKVSDELKA EKSVAQCKSM LDKLKRRYKK 180 EKGKVEELGL GSCKWAFFKK MDMLMASSTR QEYGLACGVD GGEYVFMNTR VYLSRSNGFD 240 EMRDSPGESE SDEDEDGLDG HGVGVGVASA ARRRSGVGGD GEDEEEEESS FRVLADSIQK 300 FGKIYEKIEN SKRQQMMELE KMRLDFNREL ELQKKQILER AQAEIAKIQD VDEDETDTST 360 ENLSE

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence Send to blast

MDDMEDDARY PPKSFPLNRQ NPSHRHKHPI RPPPFHHHNP RYEDQEDDDY DDEEEHAEFE  60
NYGNDVVDNT NNEDDDDDCG NGVQNGYFKK RKVGVGGSPV PTGYEFAPRV KYSYGDDWSE  120
HATFVLLEVW GDKFLQLGRT SLRSDDWLDV AEKVSDELKA EKSVAQCKSM LDKLKRRYKK  180
EKGKVEELGL GSCKWAFFKK MDMLMASSTR QEYGLACGVD GGEYVFMNTR VYLSRSNGFD  240
EMRDSPGESE SDEDEDGLDG HGVGVGVASA ARRRSGVGGD GEDEEEEESS FRVLADSIQK  300
FGKIYEKIEN SKRQQMMELE KMRLDFNREL ELQKKQILER AQAEIAKIQD VDEDETDTST  360
ENLSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	176	DKLKRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.64IL2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015966495.1	0.0	trihelix transcription factor ASIL2
Refseq	XP_025701045.1	0.0	trihelix transcription factor ASIL2
Refseq	XP_025701046.1	0.0	trihelix transcription factor ASIL2
TrEMBL	A0A445D2G3	0.0	A0A445D2G3_ARAHY; Uncharacterized protein
STRING	GLYMA09G32130.2	1e-147	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2441	34	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-74	Trihelix family protein