 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aradu.5E40Q |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
bHLH |
| Protein Properties |
Length: 213aa MW: 24263.1 Da PI: 6.7835 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.5E40Q | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 17.7 | 6.3e-06 | 130 | 169 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
RR++i +++ L++l+P + +k Ka +L + ++Y++sLq
Aradu.5E40Q 130 RREKISERMKMLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 169
9*****************9....555*****************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MMAAFSSYQY HPNFLPLDST FFQNLNTTTT TSVPIPQSIL HHHQEEGFSD FNNNTISCVD 60
QISSCNKVSF ISNSDNEPSN VSVTTRNNLS PQSSMVVDKL EIGEQVTQKD GTTRKRMRKS 120
NNNNGGGVVR REKISERMKM LQRLVPGCDK VTGKALMLDE IINYVQSLQN QVEFLSLKLA 180
SENGSQFWDT EEQRQKFLHP YEFINNNNLC SFH
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT031107 | 6e-65 | KT031107.1 Glycine max clone HN_CCL_82 bHLH transcription factor (Glyma06g17420.1) mRNA, partial cds. |
| GenBank | KT031251 | 6e-65 | KT031251.1 Glycine max clone HN_CCL_22 bHLH transcription factor (Glyma04g37690.1_like1) mRNA, partial cds. |
