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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Aradu.573UI |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family |
bHLH |
Protein Properties |
Length: 520aa MW: 56349.4 Da PI: 6.285 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Aradu.573UI | genome | NCGR_PGC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 27.3 | 6.3e-09 | 336 | 384 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq
Aradu.573UI 336 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 384
58*************************9....556*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 520 aa
Download sequence Send
to blast |
MGDRENFEVD RDRDRVNYST SMASDWRFGV GNFANSMVDS YVTNFWDHPN SQNLGFCDIN 60 GGSSNMNVIG KDGFGYGRGS HDHRTLEMGW NHASSVLKGD NNAFLPNGPA MLPQSLSQFP 120 SDSGFIERAA RLSCFGAGNS VDMVNSFGIP QSMNLYARIG GTMQGTGDAL LGHGLRSAAL 180 GGQSHKSDPN VVEDAKDDKE MTLQDDKRSE NLAVSHDEGK QALGGSANES DRAESSGRDD 240 SPMLECTSGE PSNKGLSSKK RKRIGLDADK DKVDGSPEQP GAAVKENSGS RQQKGEQQPT 300 PSTKGSGKNA KQGSQASDSP KEEYIHVRAR RGQATNSHSL AERVRREKIS ERMKFLQDLV 360 PGCSKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATVNPR MDFNIEGLLA KEILQQRAGT 420 SSAHGFPPEL SMAFPPLHPS RPGLIHSTLP SMANSSDILR RTLQPNLAHL SGGFKDPNQL 480 PEVWDDELHN VVQMTFPTSA PPSCQDLDGS APSGQTKTEP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 2e-39 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |