PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.53P8J
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 268aa    MW: 30141.7 Da    PI: 6.8776
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.53P8JgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.83.5e-07108163454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC........TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkas.....kapskKlsKaeiLekAveYIksL 54 
                  ++  rE+ RRd++N++ + +  l  ++s     +  ++K +K++iL  Av+ +++L
  Aradu.53P8J 108 TKACREKLRRDKLNERHAIILNLFLELSsilepGSMQPKTDKVAILSDAVRVVNQL 163
                  6778**********9977666666664446666669****************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.1E-997177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.788104163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-4108163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.32E-6108168No hitNo description
SMARTSM003533.5E-4110169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-9111185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MILSLRVLLI SSHTNTCCFF SLPLTMDIDS SGGTSNWLYD YGFDNISVAD FMAPDSAAFT  60
WLPQPQPHTN FKPPSSNISL EMEYSVDSIV LEGGPSKRLR TESCASGTKA CREKLRRDKL  120
NERHAIILNL FLELSSILEP GSMQPKTDKV AILSDAVRVV NQLRDEAEKL KEMNDEMLEK  180
IKELKAEKNE LRDEKNRLKV EKEKLEQQFK MTNVQPSFLH HAPAATKAHG ASQKLIPFIG  240
YPGIAMWQFM PPAAVDTSKD HLLRPPVA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.53P8J
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936074.20.0transcription factor bHLH115
SwissprotQ9C6823e-70BH115_ARATH; Transcription factor bHLH115
TrEMBLA0A445BWY30.0A0A445BWY3_ARAHY; Uncharacterized protein
STRINGGLYMA13G38140.11e-119(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149161214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51070.11e-72bHLH family protein
Publications ? help Back to Top
  1. Liang G,Zhang H,Li X,Ai Q,Yu D
    bHLH transcription factor bHLH115 regulates iron homeostasis in Arabidopsis thaliana.
    J. Exp. Bot., 2017. 68(7): p. 1743-1755
    [PMID:28369511]