PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.4NW8B
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 586aa    MW: 65412.7 Da    PI: 5.162
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.4NW8BgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-102202601055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  Aradu.4NW8B 220 RKRRERINERLRILQTLVPNG-----TKVDISTMLEEAVHYVKFLQ 260
                  9******************97.....8******************9 PP
2HLH322.2e-105035431055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Aradu.4NW8B 503 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 543
                  9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.53E-13210271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.907210259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-11215269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-11216265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.37E-11219264No hitNo description
PfamPF000101.1E-7220260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-14491558IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.345493542IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-12498552IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-11499548IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-7503543IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
MEPAQLISEE WGSLSGLYTA EEAEFMTQLL AGNYSVSEKH YSSVAMPPSS AFWPCHESTK  60
VSFKGINGNS YLPPSHIENA NYLCFSQGSS SSTENGNIYS YDTTTNFDSM STDNCLEGAK  120
FSPQSNDNSR AQISGIIDDD AKIECERMVF EPAEDLENPT KRLRSSSEVP RNMRNVKSRK  180
ENPLPSSYTS NSEEDKGPAA PKNRRSSSGA ATDPQSLYAR KRRERINERL RILQTLVPNG  240
TKVDISTMLE EAVHYVKFLQ LQIKLLSSDD LWIKKMEPGE EIYAEWSSLS GSYTAEEADF  300
MNQFLSNCSH TQQLHANLNA GIPSALWYGH ADINSSSFYA ADASNNMFPI IDSDNLNDPL  360
TNLVDPSLST YTDKELGVDV IADKNVPSQP VSEPAQENIT SKLEKPRKRS RSSNEILKNK  420
KNVKTTKKPK SASISNIKEE DRCPGQGENL SCSCSEDDLD TCHELNEGES SSLSLKYSKG  480
LQLNGKSRSS RGSATDPQSI YARRRRERIN ERLRILQNLV PNGTKVDIST MLEEAVQYVK  540
FLQLQIKLLS SDDLWMYAPI AYNGMNIGLD FNITTPKQNN NSRYIA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.4NW8B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015941704.10.0transcription factor bHLH84-like
RefseqXP_016174491.20.0transcription factor bHLH84-like
RefseqXP_025679561.10.0transcription factor bHLH84-like
TrEMBLA0A4D6N8I11e-169A0A4D6N8I1_VIGUN; Aprataxin
STRINGGLYMA20G26991.12e-96(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-41bHLH family protein