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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Aradu.49B5R |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family |
TALE |
| Protein Properties |
Length: 361aa MW: 41138.8 Da PI: 8.302 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.49B5R | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 27.9 | 3.9e-09 | 291 | 328 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yp+ +e+ L +++gL+ +qV++WF N R +
Aradu.49B5R 291 FEHflHPYPTDSEKDTLVQQTGLSRCQVSNWFINARVR 328
564459******************************88 PP
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| 2 | BELL | 80 | 3.2e-26 | 173 | 240 | 5 | 72 |
BELL 5 lqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
++ + + L +l+eV+k+Y y++q+q v+ssF+ vaglg+a+pY+s+ k iS+hF cLk ai +q+
Aradu.49B5R 173 HHCRDSVLGCMLDEVYKKYILYCQQMQSVVSSFQKVAGLGNATPYISFGIKSISKHFGCLKHAIYDQL 240
6677788899*******************************************************996 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MEENFESSHV PQQSRRNKLR EMVQTQKQQP PPQPFPPSFQ TSITQPFETN PISSTFISTK 60
PPYHYSFLAK SSSQLEHYPA SFHNLLLPPY LVDQNHHVPQ EPCSDVRNIG PVVVPFTGYA 120
SILKRSRFLK PAQQILEDMC GSVLNPPPRL NESGDDHEED PIIGTNGRDG VQHHCRDSVL 180
GCMLDEVYKK YILYCQQMQS VVSSFQKVAG LGNATPYISF GIKSISKHFG CLKHAIYDQL 240
QFTMKNTTPA SNNVVEKGLQ SVQRLHSVQP VLRSQRGLPD HAVALLRRWL FEHFLHPYPT 300
DSEKDTLVQQ TGLSRCQVSN WFINARVRIW KPMVEEMHMN GEQKAQESEV IHHARKPIIG 360
P
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that is involved in the preservation of the spiral phyllotactic arrangement leading to a regular pattern of organ initiation. Required for maintenance of stem cell fate in the shoot apical meristem, and is essential for specifying floral primordia and establishing early internode patterning events during inflorescence development. Acts as transcription repressor of AG expression in floral and inflorescence meristems. Is also responsive of the nuclear import of SHOOT MERISTEMLESS (STM). In the fruit, plays a central role in patterning by negatively regulating SHP expression in order to prevent replum cells from adopting a valve margin cell fate. {ECO:0000269|PubMed:12874117, ECO:0000269|PubMed:12897247, ECO:0000269|PubMed:13678595, ECO:0000269|PubMed:15019989, ECO:0000269|PubMed:15120075, ECO:0000269|PubMed:15155890, ECO:0000269|PubMed:16741748}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Pabón-Mora N,Wong GK,Ambrose BA
Evolution of fruit development genes in flowering plants.
Front Plant Sci, 2014. 5: p. 300
[PMID:25018763] - Khan M, et al.
Repression of Lateral Organ Boundary Genes by PENNYWISE and POUND-FOOLISH Is Essential for Meristem Maintenance and Flowering in Arabidopsis.
Plant Physiol., 2015. 169(3): p. 2166-86
[PMID:26417006] - Andrés F, et al.
Floral Induction in Arabidopsis by FLOWERING LOCUS T Requires Direct Repression of BLADE-ON-PETIOLE Genes by the Homeodomain Protein PENNYWISE.
Plant Physiol., 2015. 169(3): p. 2187-99
[PMID:26417007] - Bencivenga S,Serrano-Mislata A,Bush M,Fox S,Sablowski R
Control of Oriented Tissue Growth through Repression of Organ Boundary Genes Promotes Stem Morphogenesis.
Dev. Cell, 2016. 39(2): p. 198-208
[PMID:27666746] - Sehra B,Franks RG
Redundant CArG Box Cis-motif Activity Mediates SHATTERPROOF2 Transcriptional Regulation during Arabidopsis thaliana Gynoecium Development.
Front Plant Sci, 2017. 8: p. 1712
[PMID:29085379] - Simonini S,Stephenson P,Østergaard L
A molecular framework controlling style morphology in Brassicaceae.
Development, 2018.
[PMID:29440299]
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