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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Aradu.37JVZ |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
C2H2 |
| Protein Properties |
Length: 295aa MW: 33372.1 Da PI: 6.9354 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.37JVZ | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 16.8 | 1.9e-05 | 131 | 150 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C k+F+r n++ H+
Aradu.37JVZ 131 FSCPVCYKTFNRYNNMQMHM 150
89*****************9 PP
|
| 2 | zf-C2H2 | 14.8 | 8e-05 | 215 | 237 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C +Cgk F + + ++H +++
Aradu.37JVZ 215 FMCRKCGKAFAVRGDWRTHEKNC 237
89*****************9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MDTSFVLVHD KMEEDIRIYG GRNKPKGEAK GEDDNNDEEE DNNNSVTVAL HIGLPNPSAA 60
ELATITSMES SSNNNNNSNS SSTEKEQHHH EEEGEGSEES QCHKGFLGTR LNKGQYWIPT 120
PTQILIGPTQ FSCPVCYKTF NRYNNMQMHM WGHGSQYRKG PESLRGTQPT GMLRLPCYCC 180
APGCRNNIDH PRSKPLKDFR TLQTHYKRKH GIKPFMCRKC GKAFAVRGDW RTHEKNCGKL 240
WYCICGSDFK HKRSLKDHIK AFGSGHAALG IHGGLFEEEE EPASEVEQDN DELNQ
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
