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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.33TM5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | CAMTA | ||||||||
Protein Properties | Length: 256aa MW: 28803.2 Da PI: 8.3185 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 25.4 | 2.4e-08 | 167 | 203 | 74 | 113 |
CG-1 74 KvggvevlycyYahseenptfqrrcywlLeeelekivlvh 113 K g+v+vl+cyYah+e+n++fq r wl + + + +l h Aradu.33TM5 167 KAGNVDVLNCYYAHGEDNENFQSR--WLKQAT-LQLHLTH 203 899*******************98..554444.4455544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50011 | 8.683 | 96 | 256 | IPR000719 | Protein kinase domain |
Gene3D | G3DSA:3.30.200.20 | 1.1E-10 | 97 | 145 | No hit | No description |
SuperFamily | SSF56112 | 3.13E-10 | 97 | 220 | IPR011009 | Protein kinase-like domain |
PROSITE pattern | PS00107 | 0 | 102 | 125 | IPR017441 | Protein kinase, ATP binding site |
PROSITE profile | PS51437 | 13.152 | 162 | 225 | IPR005559 | CG-1 DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
MIPEAFSILI QVMSIHMDIP NNTSDSEALP GSGGFNANNQ WHSFFKLLKK GSQMPFQPFH 60 LLKKNIPKLT RRKSKRAATD DFIHGMIVLV YYIFMVRNDN VIGEGGYAEV YLGKLEDGTF 120 VAIKKLTRGN EEEMTADFLS ELGIICCILS LLNKFCLSSI LHNALSKAGN VDVLNCYYAH 180 GEDNENFQSR WLKQATLQLH LTHFDPRLEH IVLIYYRDIK ERYKSGISHS PAAPVSLVGS 240 SQTSSVPSSV KIVTYN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.33TM5 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016164680.1 | 5e-71 | receptor-like cytosolic serine/threonine-protein kinase RBK1 | ||||
Refseq | XP_025664887.1 | 5e-71 | receptor-like cytosolic serine/threonine-protein kinase RBK1 | ||||
TrEMBL | A0A445EC53 | 1e-143 | A0A445EC53_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA13G28370.2 | 2e-39 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF20769 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 4e-11 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |