PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.2QR5U
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 513aa    MW: 57760.8 Da    PI: 5.5329
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.2QR5UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.31e-28350439185
     trihelix   1 rWtkqevlaLiearr......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                  rW+k+evlaLi++r       + +e+ r++ ++ plWe++s+ m e g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ l
  Aradu.2QR5U 350 RWPKDEVLALINLRCntqvssNNDENGRETHKALPLWERISQGMVELGYTRSAKRCKEKWENINKYFRKTKDANKKR-SLDSRTCPYFHLL 439
                  8*************9444444444444456699*******************************************8.9999******987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd122032.60E-22349420No hitNo description
PfamPF138373.1E-19349441No hitNo description
PROSITE profilePS500906.423350413IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    Send to blast
MAELGYKRSA EKCKEKFEEE SRYFSSNINF TNKTITPPPT TTTGYRFLSE LEELYHQQDN  60
SDHHHQQEVV VVEKQPSSTD GQEDKVVMDQ ALGEEDDKEN DEEVVAGAAV VVLPEKIITT  120
KTKERKRKRG GGDGDGNGDG VRFEMFKGFC ESIVHKMMEQ QEEMHNKLIE DMVRRDEEKL  180
AREEAWKKQE VERMNKELEI MQQEQAIAGD RQANIIEFLK KFAPEIQTLV CVEEDHDDHN  240
NNGRNKLVKV TNNNNNVEHN GSNLLLHSQN PNPPSSPSSS SAVIVNNQNG VVVAAASSST  300
NPSSSPIIQA GKNPNSTYLN NDSPIVEADS AAKKAAATTA NCEKDEIGRR WPKDEVLALI  360
NLRCNTQVSS NNDENGRETH KALPLWERIS QGMVELGYTR SAKRCKEKWE NINKYFRKTK  420
DANKKRSLDS RTCPYFHLLS SLYSQGKLLL QPEKQETTTN NNDNHGKKMV GDHQTSSQMG  480
SAIAADDNHD HGGENNNNNK ALMQAPSLDF DQF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.2QR5U
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150417e-42AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015940190.20.0trihelix transcription factor GTL2, partial
TrEMBLA0A445BJK50.0A0A445BJK5_ARAHY; Uncharacterized protein
STRINGXP_007144820.11e-132(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50433355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.11e-42Trihelix family protein