PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.0Z2ZN
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 260aa    MW: 29915.7 Da    PI: 7.0899
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.0Z2ZNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding544e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+++++  G ++W++ ++  g+ R++k+c++rw +yl
      Aradu.0Z2ZN 14 KGPWTPEEDQILINYINTNGHNNWRALPKQAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding53.74.9e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
      Aradu.0Z2ZN  67 RGNFTNEEEETILKLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.889961IPR017930Myb domain
SuperFamilySSF466893.25E-3011108IPR009057Homeodomain-like
SMARTSM007172.9E-141363IPR001005SANT/Myb domain
PfamPF002491.3E-151461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.6E-251568IPR009057Homeodomain-like
CDDcd001671.00E-101661No hitNo description
PROSITE profilePS5129425.72862116IPR017930Myb domain
SMARTSM007173.9E-1566114IPR001005SANT/Myb domain
PfamPF002497.6E-1667112IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-2669116IPR009057Homeodomain-like
CDDcd001671.22E-1069112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MGRAPCCEKL GLKKGPWTPE EDQILINYIN TNGHNNWRAL PKQAGLLRCG KSCRLRWINY  60
LRPDIKRGNF TNEEEETILK LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLPPQE  120
NNNIKSTKKP RPKQKKKLEI TKKSNKTSSK QKQEKEEEEP IIKIEGRTMM SPNTHGGESI  180
NNDGDGNKDD NLALDEEFWS EVLSSDNSYD EDARKFEDIE FGDLDLFHFP LLSSSASTVA  240
CDGMDSWYDF CTKSLELPQL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-26121165108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that regulates freezing tolerance by affecting expression of CBF genes. {ECO:0000269|PubMed:24415840}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.0Z2ZN
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA), jasmonic acid (JA), salt (NaCl), ethylene and auxin (IAA) (PubMed:16463103). Down-regulated by cold treatment (PubMed:24415840). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:24415840}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015948728.11e-166transcription factor MYB14
RefseqXP_025644717.11e-166transcription factor MYB14
SwissprotQ9SJX82e-80MYB14_ARATH; Transcription factor MYB14
TrEMBLA0A445EG971e-164A0A445EG97_ARAHY; Uncharacterized protein
STRINGGLYMA03G31980.12e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-75myb domain protein 14
Publications ? help Back to Top
  1. Chen Y, et al.
    AtMYB14 Regulates Cold Tolerance in Arabidopsis.
    Plant Mol. Biol. Rep., 2013. 31: p. 87-97
    [PMID:24415840]