PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.0QH3E
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 204aa    MW: 23689.4 Da    PI: 4.5946
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.0QH3EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.77.9e-13129199171
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkke 71 
                  +fYn+Y+    F +rk+   +  ++g+i++r++vC+keg r+ +  + ++++++ r+ trt+C a+l+vk++
  Aradu.0QH3E 129 QFYNAYSCWHEFVMRKDDVVRD-NQGRIISRQLVCNKEGWRNMRYFDlDDRSKEARSLTRTKCPARLRVKLD 199
                  6****************99998.8888****************999877888999**************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.0E-10129199IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MEPSLELCFH RLGSGVDLGG RGLPSPLLSR LRITCRSSAL YSLDFKLWLS SRGKIMSRNE  60
DDVKNDSDND LGDDFDYQPN ADDDAEDDDM DLLDSTSKSE EVCGVKRIEN LMVEDIWNLE  120
FRTEDEACQF YNAYSCWHEF VMRKDDVVRD NQGRIISRQL VCNKEGWRNM RYFDLDDRSK  180
EARSLTRTKC PARLRVKLDY GCGR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.0QH3E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997469.11e-105protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025692713.11e-105protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DGE65e-95A0A445DGE6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-10FAR1-related sequence 5