PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.08GFU
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 367aa    MW: 42710.4 Da    PI: 6.6577
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.08GFUgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1578e-49381832128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 
                   pGfrFhPtdeelv +yL++kve+k+l++ e ik+vdiyk++PwdLp    + +ekewyfF+ r +ky+++ r+nr+t sg+Wkatg dk+++s+   
  Aradu.08GFU  38 LPGFRFHPTDEELVGFYLRRKVEKKPLKI-ELIKHVDIYKYDPWDLPkVGSSMGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSAnyn 134
                  69***************************.89***************445556899**************************************9776 PP

          NAM  96 .....kgel.............vglkktLvfykgrapkgektdWvmheyrl 128
                       +                +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  Aradu.08GFU 135 nnynnN--SnnnskehgdhhecIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 183
                  666551..15566677788888***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-5234220IPR003441NAC domain
PROSITE profilePS5100550.47437221IPR003441NAC domain
PfamPF023652.1E-2439183IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MDVAKLYMNN DYSEEHEHEY EHDEDDDEMM KEEKEVVLPG FRFHPTDEEL VGFYLRRKVE  60
KKPLKIELIK HVDIYKYDPW DLPKVGSSMG EKEWYFFCIR GRKYRNSIRP NRVTGSGFWK  120
ATGIDKPIYS ANYNNNYNNN SNNNSKEHGD HHECIGLKKS LVYYRGSAGK GTKTDWMMHE  180
FRLPPNNNNG AKLLSNNQEA NNATKDLHEA EVWTLCRIFK RIPTYKKYTP NLKDSSTSPL  240
MNKPINNINH QTDSSVTSIS CSLESDNNNS KQFLTFTNTM GIQQCERKPL VIGHVDERNN  300
NFFLDHSSIH HQQAPTTITT TALSSSSYSS WNQHHVVEDY LFANENWDDL RSVVEFATDP  360
NNSKVYL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-443922119165NO APICAL MERISTEM PROTEIN
1ut4_B3e-443922119165NO APICAL MERISTEM PROTEIN
1ut7_A3e-443922119165NO APICAL MERISTEM PROTEIN
1ut7_B3e-443922119165NO APICAL MERISTEM PROTEIN
3swm_A3e-443922122168NAC domain-containing protein 19
3swm_B3e-443922122168NAC domain-containing protein 19
3swm_C3e-443922122168NAC domain-containing protein 19
3swm_D3e-443922122168NAC domain-containing protein 19
3swp_A3e-443922122168NAC domain-containing protein 19
3swp_B3e-443922122168NAC domain-containing protein 19
3swp_C3e-443922122168NAC domain-containing protein 19
3swp_D3e-443922122168NAC domain-containing protein 19
4dul_A3e-443922119165NAC domain-containing protein 19
4dul_B3e-443922119165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.08GFU
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015973282.10.0transcription factor JUNGBRUNNEN 1 isoform X1
TrEMBLA0A445C3U10.0A0A445C3U1_ARAHY; Uncharacterized protein
STRINGGLYMA02G45371.11e-140(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101334112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-81NAC domain containing protein 42