PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Aqcoe7G421900.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 295aa MW: 32456.9 Da PI: 10.1334

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G421900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.3	5.6e-08	148	193	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ner r+RR++i ++ L +l+P+ kKl+ ++ +A +YIk Lq Aqcoe7G421900.1.p 148 PNERARKRRKDITEKTRLLAKLMPWE-----KKLDTGTMFGEAYKYIKFLQ 193 59*********************9.....8****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.13E-10	142	205	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.563	143	192	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.7E-5	148	193	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.9E-8	149	200	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	7.3E-8	149	198	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.93E-6	149	196	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence Send to blast
MENKPSSSSY SSSVFAFPPI LTSNHQKQLP KPEPIDSSHF PDLNDEWIYQ LPTLHSLEEN 60 NNTNIKKNKN NNNKMKMKNL PISVSTKRFR SSSPPLPLPP PPPSATTSTT NDSYTLEAIV 120 RNHLRPPSSS PLLLPSSSST TSSSSLSPNE RARKRRKDIT EKTRLLAKLM PWEKKLDTGT 180 MFGEAYKYIK FLQAQVNVLQ SMPFQSSFIS SSKPPPCGGV GGGDGGGGTT SATFGGLEKL 240 NRQQLLQVLV NSPVAQTAFS SQQCCVYSLE QVLWLKKNLM EQMLLLGSSF GPYY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	157	RKRRKD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22100.1	2e-12	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe7G421900.1.p