PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G364500.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 142aa    MW: 16765.9 Da    PI: 7.0727
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G364500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.2e-053557223
                       EETTTTEEESSHHHHHHHHHH.T CS
            zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                       +C+ C+  F+r+++L+ H    H
  Aqcoe7G364500.2.p 35 VCTVCSNQFRRQEDLEDHAEEyH 57
                       7*****************87766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM0035512529IPR015880Zinc finger, C2H2-like
SMARTSM003551.13457IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.0993462IPR007087Zinc finger, C2H2
PROSITE patternPS0002803657IPR007087Zinc finger, C2H2
SMARTSM00355256689IPR015880Zinc finger, C2H2-like
SuperFamilySSF576673.42E-567116No hitNo description
PROSITE patternPS0002806889IPR007087Zinc finger, C2H2
PROSITE profilePS501578.55994116IPR007087Zinc finger, C2H2
SMARTSM003550.7994116IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028096117IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MDRTLYCCHC TVEGFPDVYQ MRKHYRNSHR GLKVVCTVCS NQFRRQEDLE DHAEEYHQKK  60
SERLIVSCIH CPRMFLYKFG LKCHNGVVHD KLQVLCKKCG NVFLDEIDLD HHVKKHHNKF  120
FSHHNSDGSH SDDEEEQAHE D*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DQB27e-99A0A2G5DQB2_AQUCA; Uncharacterized protein
STRINGAquca_016_00153.11e-99(Aquilegia coerulea)