PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G349300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Dof
Protein Properties Length: 474aa    MW: 53879.7 Da    PI: 7.4418
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G349300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof56.75.2e-183793460
             zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                        alkcp+C+stntkf yy n + s P ++C  Cr+ W   G l ++Pv  g+ k+++
  Aqcoe7G349300.1.p 37 VALKCPKCESTNTKFSYYQNQQKSHPCHYCNDCRQSWIVNGELSDIPVVEGQGKRRQ 93
                       5789********************************************655544443 PP
2zf-Dof57.92.1e-18105147547
             zf-Dof   5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalr 47 
                         lkcprC+stntkf yy n   s+P +fC+ C+r Wt GG l 
  Aqcoe7G349300.1.p 105 GLKCPRCESTNTKFAYYQNRDKSKPCHFCHDCQRQWTVGGRLN 147
                        589*************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-112992IPR003851Zinc finger, Dof-type
PfamPF027011.5E-163891IPR003851Zinc finger, Dof-type
PROSITE profilePS5088417.8123993IPR003851Zinc finger, Dof-type
Gene3DG3DSA:2.20.28.104.5E-465118IPR004039Rubredoxin-type fold
ProDomPD0074781.0E-10105148IPR003851Zinc finger, Dof-type
PfamPF027017.3E-17106153IPR003851Zinc finger, Dof-type
PROSITE profilePS5088417.513106160IPR003851Zinc finger, Dof-type
PfamPF052661.2E-42300472IPR007930Protein of unknown function DUF724
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MDSSKVFSFR QMVEMKSMNH VSMDVEDGQA QALIKKVALK CPKCESTNTK FSYYQNQQKS  60
HPCHYCNDCR QSWIVNGELS DIPVVEGQGK RRQPDNSAPD HARVGLKCPR CESTNTKFAY  120
YQNRDKSKPC HFCHDCQRQW TVGGRLNAFG GQKKTRQLEG SGEMASVRGS KSNVANNETL  180
EVIHTECSKK FSCSAQDHQP VSVFPEKFNS HIEKNSEGFH FDDEVTPHEV VNLSDASRRP  240
ESPESSNVVE NSSCVKKCNS FNDFCTNARE NEMAQHISVD VETTTSRQQS PESSPLESSL  300
PFIKSSFMWP QFESMEVFRS LPQQPHFNPL KERDDYLREG AAIGLMLSFT QLVEATRMTQ  360
FDDPRNMFDT KLKALQSLEE HGFAIQPLRT QLVKLLRLKE SCGQLSCKLK TVTREVNEEL  420
ESVALLDTDI QMLKERRKMK AFKVAELQKN SEQIKESIRA ARSNFDTLVA APW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DR351e-177A0A2G5DR35_AQUCA; Uncharacterized protein
STRINGAquca_016_00317.11e-177(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.19e-15DOF zinc finger protein 1