PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G216200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family HB-other
Protein Properties Length: 356aa    MW: 40332.8 Da    PI: 4.4513
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G216200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.21.4e-08286333653
                        S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
           Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                        +++k q+++Le+++ +++ p+ ++   + + ++L+ +++  WF  +Ra
  Aqcoe7G216200.1.p 286 RLKKVQIQTLERVYSRSKRPTNAMVSSIVHVTNLPRKRIVQWFEEKRA 333
                        57899******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.378278338IPR001356Homeobox domain
SuperFamilySSF466891.24E-9280345IPR009057Homeodomain-like
CDDcd000864.94E-6284333No hitNo description
SMARTSM003895.9E-5284342IPR001356Homeobox domain
PfamPF000464.2E-6286333IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.5E-8286334IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002229Biological Processdefense response to oomycetes
GO:0009414Biological Processresponse to water deprivation
GO:0009682Biological Processinduced systemic resistance
GO:0009787Biological Processregulation of abscisic acid-activated signaling pathway
GO:0010118Biological Processstomatal movement
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000071Biological Processregulation of defense response by callose deposition
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MAASVASCSS LVPKSTTLSF PHSSQQERRR NEVQFVGYPR NSIFTLSTLP FARRKNNIPA  60
ITSNNNRKKR KNNKILPQNG DAEGENGDED PIEALFNLLE EDLKNDLSSD EGDDEVTEDD  120
LAKLERELEE AFGNDDELSG TLSSYSENSE SDDDDDDEED DDADDDDDEV DDDDDDEEER  180
PIELKKWQLR RLASALKIGR RKTSIKSLAA ELCLDRAVVL ELLRKPPPDL LLLSAALPDR  240
IVQTPSELEI KPIEASTELT ENVLKPEPEV KLPVHVMQSR WSMQKRLKKV QIQTLERVYS  300
RSKRPTNAMV SSIVHVTNLP RKRIVQWFEE KRAEDGIPHK RLPFQRSSSE TVLSN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15270RRKNNIPAITSNNNRKKRK
Functional Description ? help Back to Top
Source Description
UniProtMay modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity). Homeodomain transcription factor that mediates jasmonic acid (JA)-mediated COI1-dependent and abscisic acid (ABA)-mediated PMR4-dependent resistance to infection by necrotrophic fungal pathogens (e.g. B.cinerea and P.cucumerina) and bacterial pathogens (e.g. P.syringae DC3000); this resistance involves at least callose deposition (PubMed:15923348, PubMed:20836879, PubMed:21564353). Required for the P.fluorescens WCS417r-triggered JA-dependent induced systemic resistance (ISR) against both P.syringae DC3000 and H.arabidopsidis (PubMed:20836879). Negative regulator of the ABA-dependent drought resistance (PubMed:19175769). {ECO:0000250|UniProtKB:Q70Z19, ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769, ECO:0000269|PubMed:20836879, ECO:0000269|PubMed:21564353}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Constitutively expressed in healthy plants but repressed in response to infection by necrotrophic fungi (PubMed:15923348). Repressed by drought and abscisic acid (ABA) (PubMed:19175769). {ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026454430.11e-107protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3-like isoform X1
SwissprotQ8H0V52e-69OCP3_ARATH; Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBLA0A2G5FCD90.0A0A2G5FCD9_AQUCA; Uncharacterized protein
STRINGAquca_001_00810.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.11e-50overexpressor of cationic peroxidase 3
Publications ? help Back to Top
  1. García-Andrade J,Ramírez V,López A,Vera P
    Mediated plastid RNA editing in plant immunity.
    PLoS Pathog., 2013. 9(10): p. e1003713
    [PMID:24204264]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Gamir J,Pastor V,Kaever A,Cerezo M,Flors V
    Targeting novel chemical and constitutive primed metabolites against Plectosphaerella cucumerina.
    Plant J., 2014. 78(2): p. 227-40
    [PMID:24506441]