 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aqcoe4G214000.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
|
| Family |
M-type_MADS |
| Protein Properties |
Length: 151aa MW: 17929.8 Da PI: 8.5891 |
| Description |
M-type_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aqcoe4G214000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 34.9 | 2e-11 | 6 | 40 | 8 | 42 |
HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
SRF-TF 8 nrqvtfskRrngilKKAeELSvLCdaevaviifss 42
r+ ++ +R+n + KKA ELS LC+++++ ii+ +
Aqcoe4G214000.1.p 6 VRKNSYRRRKNNLVKKADELSKLCAVKACAIIYNP 40
68889***************************975 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 151 aa
Download sequence Send
to blast |
MRDHVVRKNS YRRRKNNLVK KADELSKLCA VKACAIIYNP YDPIPSVWPS NDEARRLLLQ 60
FLTLPDNMQT RKLFNLEYFL KQLIVKLEGK LERAEKSKRE EEIIDLIMRS ANGEVLHGVK 120
HEDVLDIECY IEQRMKEIYE RGCEQPNLGY Y
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | JX680239 | 1e-140 | JX680239.1 Aquilegia coerulea MADS-box protein AGL82 mRNA, complete cds. |
