PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G151200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 283aa    MW: 32805.4 Da    PI: 9.6721
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G151200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57367.33.3e-2192192297
             DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksg.kep.sfskehdqki 88 
                         f++lws+ De+vlL G+i+fk+kt++   +++   + + + ++ks+s++++ +q+  K r+L++K+   v++++sg k+p + ++ h+++ 
  Aqcoe4G151200.1.p  92 PFEKLWSDADELVLLNGMIEFKTKTNSvfiDSTPKFETLLKSIEKSLSIDFTIKQVQGKFRKLRDKYFSVVERVRSGfKDPfHGKSLHEKHL 183
                        5899*********************9877777888999999********************************777634441456789**** PP

             DUF573  89 felskkiWg 97 
                        ++ls+k+Wg
  Aqcoe4G151200.1.p 184 YQLSEKFWG 192
                        ********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.7E-1993192IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MASPTTTSTS QSTSSYEDDE DAVQSSHEEE QQQISQKKKT VNISMKRPLK SVDDDNERRR  60
MVSYKKPKNI MNQVEKNAAQ PKPITGSSSK NPFEKLWSDA DELVLLNGMI EFKTKTNSVF  120
IDSTPKFETL LKSIEKSLSI DFTIKQVQGK FRKLRDKYFS VVERVRSGFK DPFHGKSLHE  180
KHLYQLSEKF WGDFKIKESK QPNVSLDVPE FFYLEQFWKG NNATLPPGLV RNKQWEECIG  240
RDNAVSLNLK AKELIIDEME IYLRRLELIK ETTHIKLDFL KK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5E5B20.0A0A2G5E5B2_AQUCA; Uncharacterized protein
STRINGAquca_011_00014.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.19e-11DNA-binding storekeeper protein-related transcriptional regulator