PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G142300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 357aa    MW: 39827.2 Da    PI: 4.7869
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G142300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57378.11.5e-24136233197
             DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgk.epsfskehdqkifel 91 
                        klfqr++se+Dei +L Gl++fk+k +k   + +++fy+f+k+s+++ ++ sq+++K+ rL +K++k+ k+ak g  +p++s++h+ k++ l
  Aqcoe4G142300.1.p 136 KLFQRIFSEKDEIDVLNGLLEFKNKGNKITNSALSEFYNFLKGSVNIGANLSQIINKVHRLHNKYRKNAKRAKPGAgHPTISNPHELKSYLL 227
                        579*******************9999999999***************************************88775389************* PP

             DUF573  92 skkiWg 97 
                        sk iW+
  Aqcoe4G142300.1.p 228 SKEIWD 233
                        *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.7E-23138233IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MAPKRPSPSD QPPSSVSISE DEIEGTEGED SEEESESESE EEKTPKPIQS SNPNNKPVEE  60
EEEEEDSDSD SDSDSDNEPV QHMVATKPTS TSTSTSTSSA AMKRPLETGD NNDKDSKKKK  120
KKIADIEEKK SGEEKKLFQR IFSEKDEIDV LNGLLEFKNK GNKITNSALS EFYNFLKGSV  180
NIGANLSQII NKVHRLHNKY RKNAKRAKPG AGHPTISNPH ELKSYLLSKE IWDDQIFKDA  240
EENKSGGVTA LNKSKSKLKS NGLLAVSPKV VDLMEEDNII GSQYQYLDQS LKPQNRLSLP  300
MPPADFGEIT AKDGWDKLGS SKAQRWKALI IKEAEVYLER VELVQEQTKW MLDMII*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117129KKKKKIADIEEKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5C4D91e-175A0A2G5C4D9_AQUCA; Uncharacterized protein
STRINGAquca_097_00003.11e-176(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.18e-14DNA-binding storekeeper protein-related transcriptional regulator