PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Basic Information? help Back to Top

TF ID

Aqcoe4G068100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

ZF-HD

Protein Properties

Length: 97aa MW: 10823.2 Da PI: 7.9173

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G068100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	80	3e-25	7	58	3	59
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +++YkeCl+Nh a+lG h +DGC+Efm+ ++ l C ACgCHRnFHR+ v++ Aqcoe4G068100.1.p 7 SMQYKECLRNHTAHLGLHILDGCQEFMNG-----RIDELLCQACGCHRNFHRKVVVD 58 579**********************96.....7899*************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	5.6E-22	8	56	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	2.0E-11	8	56	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	2.7E-21	9	54	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	21.356	10	55	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 97 aa Download sequence Send to blast
MESAGISMQY KECLRNHTAH LGLHILDGCQ EFMNGRIDEL LCQACGCHRN FHRKVVVDNH 60 VNVNGRKDVN SSRVQGMPGA DQGSVKKRKM EQTDEN*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020678177.1	9e-18	zinc-finger homeodomain protein 1-like
TrEMBL	A0A2G5CH53	2e-49	A0A2G5CH53_AQUCA; Uncharacterized protein
STRING	Aquca_055_00122.1	3e-50	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	2e-16	homeobox protein 22

Link Out ? help Back to Top
Phytozome	Aqcoe4G068100.1.p