PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

Aqcoe4G062200.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 198aa MW: 22356.4 Da PI: 9.9586

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G062200.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.9e-13	20	72	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn Er RR+++N+ ++L++llP+ + + kKls ++ ++ +YI +Lq Aqcoe4G062200.2.p 20 KKLNHNVSERDRRKKLNTLCSTLQSLLPNiD---NTKKLSIPSTICQVLKYIPQLQ 72 6789***********************88...8888***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.32E-16	17	85	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	7.03E-10	17	76	No hit	No description
PROSITE profile	PS50888	14.208	19	71	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	3.4E-14	20	86	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.4E-10	20	72	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	6.1E-8	25	77	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence Send to blast
NNLHSVNHSI SRTSSDPSTK KLNHNVSERD RRKKLNTLCS TLQSLLPNID NTKKLSIPST 60 ICQVLKYIPQ LQNQVARLKQ RKETLSSISK QSDSTHYTRQ SNVLGQSSLP TVSARRIDDS 120 QVVIHICTLK KNKSVFSEVL EIVERDNLHI LNASVITSSE NSLFYTLHVQ VNGTQRVECE 180 VLSENILSLF KKEEFFP*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026417914.1	8e-58	transcription factor ORG2-like
TrEMBL	A0A2G5DX94	1e-115	A0A2G5DX94_AQUCA; Uncharacterized protein
STRING	Aquca_014_00599.1	1e-116	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56970.1	1e-43	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe4G062200.2.p